Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSI1O43347 AL022578.1-201ENST00000439330 1433 ntBASIC4.16□□□□□ -1.74
MSI1O43347 FGF7P2-201ENST00000332473 296 ntBASIC4.16□□□□□ -1.74
MSI1O43347 RN7SKP280-201ENST00000364196 304 ntBASIC4.16□□□□□ -1.74
MSI1O43347 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.16□□□□□ -1.74
MSI1O43347 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 RNU6-952P-201ENST00000391164 108 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AL512430.2-201ENST00000406786 339 ntBASIC4.16□□□□□ -1.74
MSI1O43347 RNU2-16P-201ENST00000410712 136 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 AL389915.1-201ENST00000422463 466 ntBASIC4.16□□□□□ -1.74
MSI1O43347 RPL30P3-201ENST00000424262 333 ntBASIC4.16□□□□□ -1.74
MSI1O43347 USP9YP14-201ENST00000430663 563 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 AC122718.1-201ENST00000439448 744 ntBASIC4.16□□□□□ -1.74
MSI1O43347 RPS29P7-201ENST00000439662 171 ntBASIC4.16□□□□□ -1.74
MSI1O43347 TPT1P7-201ENST00000458300 517 ntBASIC4.16□□□□□ -1.74
MSI1O43347 FAM133DP-201ENST00000464802 691 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 AC017037.1-201ENST00000508460 471 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MSI1O43347 IGKV2-23-201ENST00000518729 323 ntBASIC4.16□□□□□ -1.74
MSI1O43347 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MSI1O43347 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.16□□□□□ -1.74
MSI1O43347 MTCYBP20-201ENST00000524239 1129 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AL139174.1-201ENST00000531489 886 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 AC107016.1-201ENST00000550463 337 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.16□□□□□ -1.74
MSI1O43347 AC106785.1-201ENST00000565935 262 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 AC083760.1-201ENST00000589621 670 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.16□□□□□ -1.74
MSI1O43347 AL606490.9-201ENST00000603331 271 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC080078.2-201ENST00000603766 501 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC103710.4-201ENST00000609301 899 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC025588.4-201ENST00000615802 908 ntBASIC4.16□□□□□ -1.74
MSI1O43347 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 AC099842.1-201ENST00000619919 596 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 AC068792.1-201ENST00000621354 417 ntBASIC4.16□□□□□ -1.74
MSI1O43347 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSI1O43347 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSI1O43347 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.16□□□□□ -1.74
MSI1O43347 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
MSI1O43347 MTND5P29-201ENST00000458676 1807 ntBASIC4.16□□□□□ -1.74
MSI1O43347 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
MSI1O43347 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.16□□□□□ -1.74
MSI1O43347 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MSI1O43347 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
MSI1O43347 AC114546.3-201ENST00000623582 1734 ntBASIC4.15□□□□□ -1.74
MSI1O43347 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.15□□□□□ -1.74
MSI1O43347 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
MSI1O43347 SAGE4P-201ENST00000442271 3381 ntBASIC4.15□□□□□ -1.74
MSI1O43347 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.15□□□□□ -1.74
MSI1O43347 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
MSI1O43347 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.15□□□□□ -1.75
MSI1O43347 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
MSI1O43347 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.15□□□□□ -1.75
MSI1O43347 AC025750.1-201ENST00000399891 379 ntBASIC4.15□□□□□ -1.75
MSI1O43347 AL024474.1-201ENST00000404655 591 ntBASIC4.15□□□□□ -1.75
MSI1O43347 AC109780.2-201ENST00000413467 845 ntBASIC4.15□□□□□ -1.75
MSI1O43347 TPMTP2-201ENST00000414372 726 ntBASIC4.15□□□□□ -1.75
MSI1O43347 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.15□□□□□ -1.75
MSI1O43347 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.15□□□□□ -1.75
MSI1O43347 LSM1P1-201ENST00000438629 273 ntBASIC4.15□□□□□ -1.75
MSI1O43347 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.15□□□□□ -1.75
MSI1O43347 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.15□□□□□ -1.75
MSI1O43347 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.15□□□□□ -1.75
MSI1O43347 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MSI1O43347 AP000797.1-201ENST00000478870 387 ntBASIC4.15□□□□□ -1.75
MSI1O43347 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 AC010460.1-201ENST00000507087 466 ntBASIC4.15□□□□□ -1.75
MSI1O43347 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.15□□□□□ -1.75
MSI1O43347 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.15□□□□□ -1.75
MSI1O43347 RNA5SP179-201ENST00000517284 121 ntBASIC4.15□□□□□ -1.75
MSI1O43347 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms