Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ELOCP13-201ENST00000443934 329 ntBASIC3.7□□□□□ -1.82
CHD1O14646 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD1O14646 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD1O14646 RNU6-1231P-201ENST00000517185 103 ntBASIC3.7□□□□□ -1.82
CHD1O14646 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.7□□□□□ -1.82
CHD1O14646 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CHD1O14646 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD1O14646 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD1O14646 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHD1O14646 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.7□□□□□ -1.82
CHD1O14646 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHD1O14646 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CHD1O14646 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CHD1O14646 RPL9P7-201ENST00000330965 580 ntBASIC3.7□□□□□ -1.82
CHD1O14646 OR4A45P-201ENST00000529954 901 ntBASIC3.7□□□□□ -1.82
CHD1O14646 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD1O14646 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD1O14646 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.69□□□□□ -1.82
CHD1O14646 OR10AB1P-202ENST00000641219 1686 ntBASIC3.69□□□□□ -1.82
CHD1O14646 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD1O14646 SNORA62.2-201ENST00000364672 152 ntBASIC3.69□□□□□ -1.82
CHD1O14646 RNU6-178P-201ENST00000384631 104 ntBASIC3.69□□□□□ -1.82
CHD1O14646 AL591416.1-201ENST00000404015 867 ntBASIC3.69□□□□□ -1.82
CHD1O14646 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD1O14646 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.69□□□□□ -1.82
CHD1O14646 RPS26P30-201ENST00000443431 335 ntBASIC3.69□□□□□ -1.82
CHD1O14646 SNORA70.14-201ENST00000516205 110 ntBASIC3.69□□□□□ -1.82
CHD1O14646 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD1O14646 AC016542.2-201ENST00000624201 619 ntBASIC3.69□□□□□ -1.82
CHD1O14646 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD1O14646 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CHD1O14646 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD1O14646 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD1O14646 RNY1P10-201ENST00000363268 113 ntBASIC3.68□□□□□ -1.82
CHD1O14646 RPS20P25-201ENST00000412447 352 ntBASIC3.68□□□□□ -1.82
CHD1O14646 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD1O14646 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD1O14646 PTP4A1P7-201ENST00000423476 514 ntBASIC3.68□□□□□ -1.82
CHD1O14646 NDUFA5P4-201ENST00000436704 385 ntBASIC3.68□□□□□ -1.82
CHD1O14646 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD1O14646 TAF9P1-201ENST00000445421 515 ntBASIC3.68□□□□□ -1.82
CHD1O14646 AC245517.4-201ENST00000448601 281 ntBASIC3.68□□□□□ -1.82
CHD1O14646 TAF9P2-201ENST00000454958 515 ntBASIC3.68□□□□□ -1.82
CHD1O14646 AP000893.1-201ENST00000474462 794 ntBASIC3.68□□□□□ -1.82
CHD1O14646 Y_RNA.670-201ENST00000516255 105 ntBASIC3.68□□□□□ -1.82
CHD1O14646 NPM1P35-201ENST00000533043 868 ntBASIC3.68□□□□□ -1.82
CHD1O14646 ISCA1P3-201ENST00000577104 373 ntBASIC3.68□□□□□ -1.82
CHD1O14646 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.68□□□□□ -1.82
CHD1O14646 Z99129.2-201ENST00000619967 314 ntBASIC3.68□□□□□ -1.82
CHD1O14646 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD1O14646 EXOC5P1-201ENST00000510543 1969 ntBASIC3.68□□□□□ -1.82
CHD1O14646 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD1O14646 SNORA41-201ENST00000384675 132 ntBASIC3.67□□□□□ -1.82
CHD1O14646 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD1O14646 AC125238.1-201ENST00000448842 249 ntBASIC3.67□□□□□ -1.82
CHD1O14646 SNRPGP9-201ENST00000456025 225 ntBASIC3.67□□□□□ -1.82
CHD1O14646 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.67□□□□□ -1.82
CHD1O14646 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
CHD1O14646 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 AC010378.1-201ENST00000619270 362 ntBASIC3.67□□□□□ -1.82
CHD1O14646 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD1O14646 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD1O14646 AP005901.5-201ENST00000545779 1796 ntBASIC3.67□□□□□ -1.82
CHD1O14646 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CHD1O14646 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 MIR181B1-201ENST00000385240 110 ntBASIC3.67□□□□□ -1.82
CHD1O14646 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.67□□□□□ -1.82
CHD1O14646 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.67□□□□□ -1.82
CHD1O14646 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD1O14646 AL356266.1-201ENST00000623311 483 ntBASIC3.67□□□□□ -1.82
CHD1O14646 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHD1O14646 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.66□□□□□ -1.82
CHD1O14646 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.66□□□□□ -1.82
CHD1O14646 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CHD1O14646 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHD1O14646 AC004866.2-201ENST00000438285 481 ntBASIC3.66□□□□□ -1.82
CHD1O14646 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CHD1O14646 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHD1O14646 MIR378A-201ENST00000362177 66 ntBASIC3.65□□□□□ -1.82
CHD1O14646 MTCO3P31-201ENST00000405526 789 ntBASIC3.65□□□□□ -1.82
CHD1O14646 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.65□□□□□ -1.82
CHD1O14646 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.65□□□□□ -1.82
CHD1O14646 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.65□□□□□ -1.82
CHD1O14646 AC147055.1-201ENST00000509261 750 ntBASIC3.65□□□□□ -1.82
CHD1O14646 XKRY-201ENST00000510392 1100 ntBASIC3.65□□□□□ -1.82
CHD1O14646 AC011611.5-201ENST00000552477 578 ntBASIC3.65□□□□□ -1.82
CHD1O14646 AC006254.3-201ENST00000603353 884 ntBASIC3.65□□□□□ -1.82
CHD1O14646 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.65□□□□□ -1.82
CHD1O14646 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHD1O14646 RAD1P1-201ENST00000231383 813 ntBASIC3.64□□□□□ -1.83
CHD1O14646 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD1O14646 SNORA67.3-201ENST00000384366 140 ntBASIC3.64□□□□□ -1.83
CHD1O14646 RNA5SP239-201ENST00000410218 129 ntBASIC3.64□□□□□ -1.83
CHD1O14646 MTCO2P17-201ENST00000424336 677 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.64□□□□□ -1.83
CHD1O14646 AC119751.1-201ENST00000513357 765 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms