Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR4789-201ENST00000577469 82 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC126365.2-201ENST00000580630 379 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 OR2AS2P-201ENST00000606902 342 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL139022.2-201ENST00000606934 443 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC104763.3-201ENST00000613765 618 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC024595.1-201ENST00000623088 387 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL137790.1-201ENST00000634283 177 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 FAM35CP-201ENST00000554755 2470 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORA70E-201ENST00000384492 135 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 RNU6-1000P-201ENST00000391066 106 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL7P25-201ENST00000404151 721 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 MTATP6P31-201ENST00000406985 692 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC092745.2-202ENST00000411880 369 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL354692.1-201ENST00000423044 315 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 USP9YP36-201ENST00000424581 829 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL390023.1-201ENST00000428836 262 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC244505.4-201ENST00000434905 287 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 HMGB1P45-201ENST00000435986 653 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 ARF4P4-201ENST00000439608 520 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 SSXP5-201ENST00000443473 287 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPS4XP6-201ENST00000477670 797 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC119751.4-201ENST00000507498 357 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC008885.1-201ENST00000514930 301 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 IGKV2-36-201ENST00000519999 223 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 YWHAZP1-201ENST00000556286 722 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC034105.3-201ENST00000565294 442 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC115085.1-201ENST00000588924 229 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC124016.2-201ENST00000610058 665 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL512427.1-201ENST00000618593 349 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP003072.4-201ENST00000624580 310 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC004808.1-201ENST00000627671 721 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL590396.2-201ENST00000636511 1041 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC006927.2-201ENST00000639256 389 ntBASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
TMX2-CTNND1H3BSU7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 MTND5P7-201ENST00000413558 1798 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 SEC63P2-201ENST00000503863 1939 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU1-70P-201ENST00000362618 164 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU5B-1-201ENST00000363286 116 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 SNORA46-201ENST00000384762 135 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR181B1-201ENST00000385240 110 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RN7SKP220-201ENST00000410611 288 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC092638.1-201ENST00000411966 1275 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 UBE2V1P9-201ENST00000414760 368 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 DPPA2P1-201ENST00000428060 556 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 HMGN2P20-201ENST00000437531 273 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNF2P1-201ENST00000442955 1010 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 HMGN2P21-201ENST00000447764 270 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR51B8P-201ENST00000449892 769 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 DNAJC19P8-201ENST00000452887 259 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU7-140P-201ENST00000459546 60 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC091179.1-201ENST00000461606 579 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 PRDX3P4-201ENST00000470828 747 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC104982.1-201ENST00000478775 574 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC078918.1-201ENST00000498515 228 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 MTATP6P9-201ENST00000515039 680 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms