Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC104978.1-201ENST00000449387 391 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 MTCO3P20-201ENST00000454926 688 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 PTGES3P5-201ENST00000455109 434 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC092757.1-201ENST00000467293 467 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 RPL21P131-201ENST00000497298 483 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 RN7SKP83-201ENST00000516512 178 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC087808.1-201ENST00000520501 361 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 OR7E13P-201ENST00000526052 910 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AL133457.1-201ENST00000564251 987 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AL160237.3-201ENST00000604114 1013 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC007179.3-201ENST00000604976 235 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AP001521.1-201ENST00000609150 300 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC092650.2-201ENST00000619984 902 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AP000553.6-201ENST00000641242 118 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 AC244517.1-201ENST00000606030 2086 ntBASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA2E9PIF3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 NUP58P1-201ENST00000502546 1738 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC007823.1-201ENST00000569932 1566 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 CEP170P1-201ENST00000502249 4587 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC007435.1-201ENST00000421086 415 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 NANOGP2-201ENST00000435391 727 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 OR10R1P-201ENST00000441524 1141 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 RPL21P23-201ENST00000446654 460 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC073387.1-201ENST00000453261 709 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 UBE2V1P12-201ENST00000503954 474 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC113347.3-201ENST00000509113 148 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC008127.2-201ENST00000549925 1075 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 LARP7P2-201ENST00000575306 125 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 XIAPP1-201ENST00000603162 600 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC011458.1-201ENST00000604034 617 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 ELOCP35-201ENST00000604289 336 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL138478.1-201ENST00000612252 832 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 OR1S1-201ENST00000624470 978 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 U6.105-201ENST00000637379 88 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AL392088.2-201ENST00000637607 285 ntBASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA2E9PIF3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC010733.2-201ENST00000589496 5702 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC093908.1-201ENST00000623125 8092 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 SNORD9-201ENST00000362566 104 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 RNU1-18P-201ENST00000363062 164 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms