Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 XIAPP3-201ENST00000312918 795 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 Y_RNA.67-201ENST00000362870 100 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 RNU6-1287P-201ENST00000362914 107 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 RNU6-356P-201ENST00000384140 107 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 Y_RNA.474-201ENST00000384341 102 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 RNU6-1060P-201ENST00000384664 107 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 RPL11P3-201ENST00000395256 523 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 RN7SKP106-201ENST00000410832 272 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 HSPE1P1-201ENST00000421494 318 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 RAC1P6-201ENST00000423911 575 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AC233279.1-201ENST00000455300 423 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AP005435.4-201ENST00000529514 284 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AC068446.3-201ENST00000555285 382 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AC113139.1-201ENST00000605049 239 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 uc_338.34-201ENST00000617467 174 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 AL731532.1-201ENST00000623972 4236 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 SNORD1C-201ENST00000363315 78 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 RNA5SP447-201ENST00000363749 119 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 RNU6-38P-201ENST00000384085 107 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 RNU4-46P-201ENST00000410818 138 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC009237.10-201ENST00000414112 510 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 BX510359.2-201ENST00000417920 305 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 RPL23AP33-201ENST00000442301 452 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 IFNWP4-201ENST00000453148 294 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 RNU6-333P-201ENST00000459117 107 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 MTCO1P29-201ENST00000496868 288 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC092436.1-201ENST00000506450 503 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 ENPP7P9-201ENST00000514456 627 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 Y_RNA.691-201ENST00000516611 103 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC103843.2-201ENST00000530523 682 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC122688.1-201ENST00000541494 223 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AL137003.2-201ENST00000606924 2538 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 MAPK10-304ENST00000641341 3984 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 AL592437.2-201ENST00000421655 2434 ntBASIC6.03□□□□□ -1.44
TMEM88BA6NKF7 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
TMEM88BA6NKF7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.02□□□□□ -1.44
TMEM88BA6NKF7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 SCARNA15-201ENST00000607520 4325 ntBASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 AC073136.1-201ENST00000449426 2884 ntBASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 Y_RNA.58-201ENST00000362807 102 ntBASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 Y_RNA.154-201ENST00000363624 102 ntBASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 RNY3P1-201ENST00000365085 102 ntBASIC6.02□□□□□ -1.45
TMEM88BA6NKF7 RN7SKP186-201ENST00000365371 303 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms