Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 RNU6-984P-201ENST00000363236 109 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AMD1P2-201ENST00000412936 992 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 RPS6P12-201ENST00000432491 726 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AL451074.3-201ENST00000437709 472 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AC105918.1-201ENST00000474399 838 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 RPS27AP18-201ENST00000515536 459 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 RNU6-295P-201ENST00000516901 104 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AC107871.2-201ENST00000612894 502 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AC004825.2-201ENST00000616634 455 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AC010378.1-201ENST00000619270 362 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AP003499.2-201ENST00000624100 483 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AC106730.3-201ENST00000624568 641 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.25□□□□□ -2.05
CNOT1A5YKK6 AC026241.1-201ENST00000517873 2142 ntBASIC2.25□□□□□ -2.05
CNOT1A5YKK6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 RPL31P1-201ENST00000398116 372 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 TVP23BP2-201ENST00000455082 615 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AC008126.1-201ENST00000549019 480 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AL445437.1-201ENST00000623157 3087 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 HMGB3P23-201ENST00000414981 585 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 RWDD4P2-201ENST00000426392 563 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 RN7SL75P-201ENST00000461926 281 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AC072039.1-201ENST00000477611 581 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 RWDD4P1-201ENST00000488019 565 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 RN7SKP60-201ENST00000516985 239 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 AC005046.1-201ENST00000608515 625 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.24□□□□□ -2.05
CNOT1A5YKK6 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.24□□□□□ -2.05
CNOT1A5YKK6 RPL9P7-201ENST00000330965 580 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 MIR137-201ENST00000385223 102 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AL583834.1-201ENST00000406943 343 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AL158825.1-201ENST00000414735 521 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 FAM92A1P2-202ENST00000504766 877 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC008121.2-201ENST00000614647 523 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AL162233.1-201ENST00000620014 944 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC091046.2-201ENST00000620775 665 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 HMGB1P10-201ENST00000395823 563 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AL591416.1-201ENST00000404015 867 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 MIR1183-201ENST00000408856 89 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 CACYBPP1-201ENST00000438592 684 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 RPL36AP51-201ENST00000487216 318 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 OR4T1P-201ENST00000554933 911 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.23□□□□□ -2.05
CNOT1A5YKK6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CNOT1A5YKK6 AC095050.2-201ENST00000510748 1458 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AC007342.7-201ENST00000624610 2337 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 RNU6-805P-201ENST00000365643 106 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 RN7SKP140-201ENST00000411196 284 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 MTND6P18-201ENST00000439477 513 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 TRBV26-201ENST00000456572 344 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 NIPA2P2-201ENST00000496376 1083 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AC135721.1-201ENST00000497954 479 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AL354943.1-201ENST00000572103 781 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 LINC00216-201ENST00000623548 1126 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AL512633.1-201ENST00000399931 655 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms