Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 DHX40P1-201ENST00000588725 1412 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC105074.1-201ENST00000623380 3095 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC107068.1-201ENST00000563286 4218 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RN7SKP115-201ENST00000363177 317 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 Y_RNA.381-201ENST00000365666 102 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNU6-483P-201ENST00000384088 108 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNU6-837P-201ENST00000391056 108 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC068050.1-201ENST00000394891 380 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 CYB5AP4-201ENST00000396692 399 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MIR298-201ENST00000401212 88 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNU6-712P-201ENST00000410558 100 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNA5SP345-201ENST00000410646 108 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNU6-516P-201ENST00000411381 104 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 USP9YP6-201ENST00000413550 854 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 BX510359.2-201ENST00000417920 305 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MTATP6P18-201ENST00000417994 673 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 USP9YP27-201ENST00000418455 438 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MTCO1P20-201ENST00000425366 358 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC137499.1-201ENST00000427602 88 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 NRBF2P3-201ENST00000432731 865 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPS17P8-201ENST00000434525 335 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC093156.1-201ENST00000440382 670 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPL23AP20-201ENST00000447965 421 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 BTF3P6-201ENST00000448054 499 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RAD23BP3-201ENST00000454157 1152 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC234775.1-201ENST00000454247 670 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC007967.1-201ENST00000455422 1159 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPS5P7-201ENST00000456664 608 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RN7SL517P-201ENST00000462240 305 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNU4-60P-201ENST00000517239 135 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNU6-709P-201ENST00000517257 104 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC090572.1-201ENST00000519251 160 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC109635.3-201ENST00000529536 185 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AP003034.1-201ENST00000534621 422 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC126177.3-201ENST00000551839 688 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL157687.1-201ENST00000554853 619 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL133153.1-201ENST00000557756 303 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC025678.1-201ENST00000567861 338 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RN7SL435P-201ENST00000584418 282 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC022726.1-201ENST00000587475 207 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPL26P30-202ENST00000602923 645 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 IGHV3-29-201ENST00000604817 344 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC008966.2-201ENST00000606157 453 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 TUG1_1.1-201ENST00000610654 145 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC015914.2-201ENST00000618167 288 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 U6.42-201ENST00000618440 107 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC009161.2-201ENST00000624626 138 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC138915.3-201ENST00000562908 1389 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL731532.2-201ENST00000623542 1953 ntBASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
IGHV4-28A0A0C4DH34 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms