Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 OR11H4-201ENST00000315409 1082 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC067945.1-201ENST00000342609 618 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 Y_RNA.97-201ENST00000363094 102 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 RNU5E-5P-201ENST00000365379 116 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 RNU6-809P-201ENST00000384461 107 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 Y_RNA.559-201ENST00000384686 107 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AL356421.1-201ENST00000403255 413 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AL160275.2-201ENST00000412010 394 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AL589823.1-201ENST00000429577 183 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 DLGAP5P1-201ENST00000430307 464 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 MTCO3P5-201ENST00000433620 714 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 MTCYBP45-201ENST00000435243 565 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 SKP1P1-201ENST00000438081 489 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 ST13P20-201ENST00000447996 1065 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AP000542.1-201ENST00000448473 371 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 TPTE2P5-203ENST00000458118 728 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 RPL9P32-201ENST00000464118 620 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 RN7SL41P-201ENST00000476144 297 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC105137.1-201ENST00000484355 562 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 TXNP6-201ENST00000510190 310 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC099522.1-202ENST00000514718 367 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 RNU6-27P-201ENST00000516146 107 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 MYL12AP1-201ENST00000518490 515 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC136624.4-201ENST00000573044 370 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC010928.3-201ENST00000587712 541 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 TPMTP1-201ENST00000592307 737 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC087752.4-201ENST00000605911 462 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC023043.4-201ENST00000612081 449 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC092656.1-203ENST00000624134 423 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC091925.2-201ENST00000625059 256 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 CRYM-AS1-204ENST00000637983 556 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 USP8P1-201ENST00000494673 3183 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC092435.4-201ENST00000623012 4159 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 AC006378.2-201ENST00000623178 2476 ntBASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN16Q9Y5I7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN16Q9Y5I7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN16Q9Y5I7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN16Q9Y5I7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN16Q9Y5I7 AL157700.1-201ENST00000561973 1432 ntBASIC3.96□□□□□ -1.77
CLDN16Q9Y5I7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.96□□□□□ -1.77
CLDN16Q9Y5I7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 MIR383-201ENST00000362257 73 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 RNU6-769P-201ENST00000384407 104 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 RAB28P1-201ENST00000411517 641 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 EIF1P3-201ENST00000423841 334 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 RPL7P36-201ENST00000444633 681 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 NUTF2P3-201ENST00000448540 384 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 CFTRP1-201ENST00000456646 183 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 RNA5SP246-201ENST00000458909 119 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AC010469.1-201ENST00000463864 576 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AC034222.1-201ENST00000494052 532 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 RPS27AP13-201ENST00000498403 237 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 COX7A2P2-201ENST00000505291 250 ntBASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN16Q9Y5I7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms