Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC020633.1-201ENST00000468439 2247 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AL391516.1-201ENST00000554380 2449 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC010266.2-201ENST00000564741 3255 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SKP191-201ENST00000364713 306 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.405-201ENST00000383979 100 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.451-201ENST00000384200 100 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 SNORD51-201ENST00000384320 80 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.524-201ENST00000384564 100 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-14P-201ENST00000384630 106 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.561-201ENST00000384694 100 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 MIR578-201ENST00000384828 96 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC079809.1-201ENST00000415468 276 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC234781.4-201ENST00000419384 244 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SL492P-201ENST00000460700 295 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AP001025.1-201ENST00000486139 332 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.706-201ENST00000516933 99 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 IGLVV-66-201ENST00000523818 341 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SL652P-201ENST00000577769 300 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AL670379.2-201ENST00000604983 252 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AL008718.3-201ENST00000610217 321 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AL049539.1-201ENST00000611964 459 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC011471.4-201ENST00000638271 216 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AL359976.1-201ENST00000418655 3528 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 ZNF826P-207ENST00000622273 1910 ntBASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA4Q9Y5G9 AC007529.1-201ENST00000418574 2178 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AC005225.5-201ENST00000623547 2225 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 MIR199B-201ENST00000384849 110 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-817P-201ENST00000391083 104 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AL358453.1-201ENST00000422522 250 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 SPATA20P1-201ENST00000423089 438 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 RPL12P11-201ENST00000439970 501 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AL137159.1-201ENST00000452808 512 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AC234775.1-201ENST00000454247 670 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 U8.22-201ENST00000459141 133 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SL83P-201ENST00000468131 297 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SL568P-201ENST00000493069 298 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 ANXA2P1-201ENST00000505539 926 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-971P-201ENST00000516920 106 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SKP11-201ENST00000517018 287 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.778-201ENST00000620203 90 ntBASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA4Q9Y5G9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 AC092747.4-201ENST00000620519 1861 ntBASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHGA4Q9Y5G9 AL033543.1-201ENST00000623440 13454 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms