Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.21□□□□□ -1.9
IFT52Q9Y366 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.21□□□□□ -1.9
IFT52Q9Y366 AC005951.1-201ENST00000576706 485 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 MAGOH2P-202ENST00000584384 429 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 AC002487.1-201ENST00000604565 994 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 AL451074.6-201ENST00000608512 729 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 AL391834.2-201ENST00000609982 546 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 AC024941.1-201ENST00000612250 334 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 AC022306.3-201ENST00000619930 550 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 AC084824.4-201ENST00000620106 731 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 U4.6-201ENST00000621618 127 ntBASIC3.21□□□□□ -1.9
IFT52Q9Y366 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
IFT52Q9Y366 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
IFT52Q9Y366 AF117829.1-206ENST00000621883 3802 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFT52Q9Y366 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFT52Q9Y366 U3.11-201ENST00000364476 212 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 SNORD3H-201ENST00000384486 214 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 MIR620-201ENST00000385232 95 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 RPL21P17-201ENST00000397467 475 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 YPEL5P1-201ENST00000419731 367 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC099677.1-201ENST00000420575 175 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 C1DP1-201ENST00000426049 402 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 RPL23AP82-202ENST00000427528 469 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 MTCYBP15-201ENST00000433123 1127 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IFT52Q9Y366 TRIM60P18-201ENST00000441518 828 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC008264.1-201ENST00000447612 367 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 RPS20P24-201ENST00000457473 361 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 CENPBD1P1-201ENST00000464061 469 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 PABPC1P3-201ENST00000469174 459 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC093752.1-206ENST00000511823 336 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 RNA5SP135-201ENST00000517019 125 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC118942.1-201ENST00000529674 1035 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 SNORD84-203ENST00000584275 78 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AP001029.3-201ENST00000588063 596 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AL022067.1-201ENST00000602426 454 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 GAS5-AS1-201ENST00000602767 694 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC006557.5-201ENST00000603126 811 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC093673.2-201ENST00000609674 331 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 VN1R74P-201ENST00000613259 503 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.2□□□□□ -1.9
IFT52Q9Y366 ZNF663P-202ENST00000641770 1131 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 AL161912.2-201ENST00000565707 3007 ntBASIC3.2□□□□□ -1.9
IFT52Q9Y366 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFT52Q9Y366 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IFT52Q9Y366 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT52Q9Y366 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT52Q9Y366 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT52Q9Y366 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFT52Q9Y366 RN7SKP280-201ENST00000364196 304 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFT52Q9Y366 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AL354719.1-201ENST00000406535 843 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AL031121.1-201ENST00000406553 254 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 SNORA11B-201ENST00000408175 129 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 RNU6-712P-201ENST00000410558 100 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 RPS7P9-201ENST00000414704 586 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFT52Q9Y366 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 DUTP6-201ENST00000425573 462 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AC093151.1-201ENST00000427711 313 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 CYCSP4-201ENST00000429682 331 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 MTND2P19-201ENST00000449129 1012 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AC097262.1-201ENST00000452559 548 ntBASIC3.19□□□□□ -1.9
IFT52Q9Y366 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.19□□□□□ -1.9
IFT52Q9Y366 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms