Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL023807.1-201ENST00000407932 359 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 GTF2IP23-201ENST00000423746 351 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 CKS1BP5-201ENST00000434172 273 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AF228730.2-201ENST00000438784 848 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC010469.1-201ENST00000463864 576 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 RN7SL594P-201ENST00000470590 287 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC013828.1-201ENST00000481845 158 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC021678.1-201ENST00000505195 936 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 HNRNPDLP4-201ENST00000605144 301 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 AL590240.3-201ENST00000621416 943 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 MTND5P3-201ENST00000438536 1800 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AL355379.1-201ENST00000405542 640 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 RNA5SP104-201ENST00000410989 118 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 OOSP1P1-201ENST00000423265 274 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 USP9YP24-201ENST00000434374 697 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AC006028.1-201ENST00000438379 402 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 OR10R1P-201ENST00000441524 1141 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 USP9YP17-201ENST00000444617 696 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 RPL31P50-201ENST00000471002 296 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 MTND1P8-201ENST00000571424 950 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 AL355812.1-201ENST00000603215 216 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 U73479.1-201ENST00000618062 168 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 MTND4P10-201ENST00000446199 1363 ntBASIC6.44□□□□□ -1.38
SHROOM4Q9ULL8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 MTND2P9-201ENST00000422293 931 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AC093698.1-201ENST00000423843 571 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 RPL31P54-201ENST00000429803 370 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AC023598.1-201ENST00000472521 361 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 RNA5SP356-201ENST00000515972 94 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AC087808.1-201ENST00000520501 361 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AC099489.2-201ENST00000574976 260 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 AL160237.3-201ENST00000604114 1013 ntBASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM4Q9ULL8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 RNVU1-3-201ENST00000364313 161 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC005517.2-201ENST00000424673 553 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AL645939.1-201ENST00000453429 797 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 TVP23BP2-201ENST00000455082 615 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC108734.3-201ENST00000481241 1165 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC005798.1-201ENST00000513715 387 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 OR4R3P-201ENST00000525084 838 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC090502.2-201ENST00000549267 280 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC069545.1-201ENST00000605671 358 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 MIR486-1-201ENST00000612171 68 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 LINC00901.1-201ENST00000617252 152 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 AC022509.4-201ENST00000621404 572 ntBASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.42□□□□□ -1.38
SHROOM4Q9ULL8 MIR448-201ENST00000362131 111 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 EIF5P1-201ENST00000400019 1231 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AL160275.2-201ENST00000412010 394 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 MRPS36P1-201ENST00000421291 307 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 USP12PY-201ENST00000427677 1064 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 BX890604.2-201ENST00000427883 474 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 NDUFS5P3-201ENST00000450668 321 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 ZNF886P-201ENST00000450781 723 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 ANP32BP2-201ENST00000454525 545 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 TRBV26-201ENST00000456572 344 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 MTCO1P30-201ENST00000515244 580 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms