Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 RPS24P6-201ENST00000452670 400 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AL445669.2-201ENST00000454425 421 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC020898.1-201ENST00000474167 787 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC087879.1-201ENST00000474343 374 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC135721.1-201ENST00000497954 479 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC112673.1-201ENST00000513168 575 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 HIGD1AP18-201ENST00000520730 278 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AP001029.3-201ENST00000588063 596 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC124312.4-201ENST00000605533 310 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AP003122.6-201ENST00000623831 495 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC034229.5-201ENST00000624258 185 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 RNU6-50P-201ENST00000362356 103 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 RNU6-1181P-201ENST00000384191 106 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AL356057.3-201ENST00000402607 340 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 RNA5SP21-201ENST00000410917 96 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 RNU2-25P-201ENST00000411041 191 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 NPM1P13-201ENST00000452663 865 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC093663.2-201ENST00000484625 313 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC009901.1-201ENST00000506703 541 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 RN7SKP157-201ENST00000516174 282 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 RNU6-1004P-201ENST00000516584 111 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 SNORA31.21-201ENST00000517180 77 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AP004371.1-201ENST00000525240 214 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 ACTR3BP3-201ENST00000565577 979 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AC009163.5-201ENST00000575421 637 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AL110115.1-201ENST00000614396 364 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AL731566.2-201ENST00000618971 317 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 U6.105-201ENST00000637379 88 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 CRYM-AS1-204ENST00000637983 556 ntBASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
COMMD3Q9UBI1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 MIR21-201ENST00000362134 72 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 CD24P4-201ENST00000382840 243 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 SNORA18.3-201ENST00000384122 132 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 MTATP6P4-201ENST00000427725 675 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 RPL34P26-201ENST00000445636 354 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 HMGB1P5-202ENST00000451497 985 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 RPS29P26-201ENST00000477483 171 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AC034244.2-201ENST00000514668 858 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 SNORA31.1-201ENST00000515993 133 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 SNORA31.5-201ENST00000516190 133 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AP003102.1-201ENST00000525638 661 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 MYL12BP1-201ENST00000569826 507 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 ELOCP35-201ENST00000604289 336 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AC140725.3-201ENST00000616193 880 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 AP004607.9-201ENST00000618202 316 ntBASIC2.17□□□□□ -2.06
COMMD3Q9UBI1 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms