Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MTND6P33-201ENST00000571794 183 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 COX6CP3-201ENST00000580869 223 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC020910.3-201ENST00000603701 874 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 MIR6768-201ENST00000610734 72 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AL161637.1-201ENST00000622380 412 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 IRF5P1-201ENST00000504852 2164 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 NOL8P1-201ENST00000508336 3529 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 RN7SKP162-201ENST00000363605 345 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 RPL17P50-201ENST00000396131 546 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 MTND1P21-201ENST00000412991 285 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 OR1AA1P-201ENST00000419597 916 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC016712.1-201ENST00000431088 378 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC119618.1-201ENST00000434191 222 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AL136380.1-201ENST00000447970 162 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 TPT1P14-201ENST00000448018 505 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 PPIAP20-201ENST00000449839 135 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 MTND1P12-201ENST00000455231 147 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC012158.1-204ENST00000483430 465 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 UBA52P7-201ENST00000486088 380 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC093270.2-201ENST00000486157 792 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC020893.1-201ENST00000502452 580 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 HMGB1P29-201ENST00000505659 499 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 RNU6-314P-201ENST00000516574 104 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 IGKV2-18-201ENST00000522607 343 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 OR4T1P-201ENST00000554933 911 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 KC877982.1-201ENST00000602313 470 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC006254.3-201ENST00000603353 884 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AP000860.1-201ENST00000605250 559 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC093799.2-201ENST00000610062 578 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC068944.2-201ENST00000610373 403 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AC090970.3-201ENST00000612566 866 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AL049536.1-201ENST00000625043 744 ntBASIC4.64□□□□□ -1.67
MKS1Q9NXB0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MKS1Q9NXB0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 OR5J1P-201ENST00000313544 939 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC007685.1-201ENST00000329806 452 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 SNORA51.8-201ENST00000384234 132 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MIR181A1-201ENST00000385026 110 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC092642.1-201ENST00000392417 425 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MIR1286-201ENST00000408112 78 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MIR548F1-201ENST00000408667 84 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 HMGN1P24-201ENST00000412282 298 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms