Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SNRPEP7-201ENST00000438350 220 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 MTND3P1-201ENST00000441336 220 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 SETD6P1-201ENST00000444575 317 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC068305.1-201ENST00000497406 726 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC020699.1-201ENST00000505161 445 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 RNA5SP216-201ENST00000516111 123 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CR383656.7-201ENST00000548164 174 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC087465.1-201ENST00000560574 245 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC091057.2-201ENST00000602594 792 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 RNU6-1155P-201ENST00000363554 107 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 DEFB109C-201ENST00000382575 264 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 DEFB109B-201ENST00000382656 264 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 RPL23AP29-201ENST00000397284 453 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 USP9YP33-201ENST00000412220 421 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 MTCYBP38-201ENST00000417160 1123 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 RPS25P9-201ENST00000435591 252 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 USP9YP35-201ENST00000435696 412 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 USP9YP25-201ENST00000457708 443 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 RNU7-136P-201ENST00000458819 69 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 MTCO2P15-201ENST00000532655 656 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 CYCSP2-201ENST00000558168 301 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AP001029.3-201ENST00000588063 596 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 DUXAP11-201ENST00000603858 526 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC080013.3-201ENST00000606839 578 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AL355810.1-201ENST00000614629 552 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AC006386.1-201ENST00000619436 415 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 AL645937.1-201ENST00000641739 1652 ntBASIC4.13□□□□□ -1.75
BLOC1S4Q9NUP1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC127526.1-201ENST00000417526 366 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC006960.1-201ENST00000419980 153 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 SKP1P1-201ENST00000438081 489 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 MTCYBP31-201ENST00000438855 1122 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL662791.1-201ENST00000441992 928 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 ANP32BP2-201ENST00000454525 545 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC093267.1-201ENST00000489176 961 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC146944.2-203ENST00000502493 354 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms