Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC093519.1-201ENST00000566109 298 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 GAS5-AS1-201ENST00000602767 694 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 U73479.1-201ENST00000618062 168 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 MIR8057-201ENST00000620957 69 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 ZNF734P-201ENST00000419494 1534 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 RNU6-251P-201ENST00000363235 104 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AL136133.1-201ENST00000413694 376 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 RPS27AP1-201ENST00000475545 471 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 MTCYBP37-201ENST00000510642 1133 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 GMPSP1-201ENST00000514075 579 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 RN7SKP244-201ENST00000516513 307 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 RNU6-579P-201ENST00000516879 102 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 ARL2BPP5-201ENST00000523141 481 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC118942.1-201ENST00000529674 1035 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 LSM6P2-201ENST00000552208 177 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 MIR4738-201ENST00000579134 87 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AL606834.3-201ENST00000602615 496 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC113368.1-201ENST00000603736 382 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AL445435.1-201ENST00000604232 665 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 IGHV3-29-201ENST00000604817 344 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AF129408.1-201ENST00000608767 431 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AL592148.2-201ENST00000612210 372 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC109454.4-201ENST00000623411 649 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AL512506.2-201ENST00000624472 458 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC087821.2-201ENST00000637086 450 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 AC073073.2-201ENST00000609827 2578 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 ZNF37BP-203ENST00000452306 1352 ntBASIC3.59□□□□□ -1.83
HPS4Q9NQG7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HPS4Q9NQG7 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.59□□□□□ -1.84
HPS4Q9NQG7 AL645937.1-201ENST00000641739 1652 ntBASIC3.59□□□□□ -1.84
HPS4Q9NQG7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 DBF4P1-201ENST00000412976 1892 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 HMGB1P5-201ENST00000255320 642 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 SNORA38.1-201ENST00000364172 131 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 MIR128-1-201ENST00000384921 82 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 MTCO1P56-201ENST00000401674 224 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 BOLA3P4-201ENST00000418151 400 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 RPL6P9-201ENST00000466502 859 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 RPL23AP14-201ENST00000468281 468 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC104982.1-201ENST00000478775 574 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC084024.2-201ENST00000503480 791 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 HMGB3P15-201ENST00000507326 574 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 MTCO3P44-201ENST00000510977 541 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 ARL2BPP6-201ENST00000512757 439 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 RN7SKP60-201ENST00000516985 239 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 DEFB130C-202ENST00000530001 230 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms