Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 Y_RNA.97-201ENST00000363094 102 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RN7SKP103-201ENST00000363848 320 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RNA5SP189-201ENST00000364920 115 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RNU6-359P-201ENST00000365466 108 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MIR135A2-201ENST00000384854 100 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RNU11-4P-201ENST00000391149 133 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MTCO3P12-201ENST00000416718 547 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL360081.1-201ENST00000428299 555 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC016712.1-201ENST00000431088 378 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RPS3AP54-201ENST00000435535 734 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL356535.1-201ENST00000440335 398 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 ZNF114P1-201ENST00000453500 292 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC104308.1-201ENST00000454621 333 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 DHFRP3-201ENST00000455595 559 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 SNORD121B-201ENST00000458838 81 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MTND3P7-201ENST00000474435 343 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RN7SL481P-201ENST00000477764 299 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RPS4XP15-201ENST00000489210 795 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AP001025.2-201ENST00000490908 477 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC010486.3-201ENST00000511602 785 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RNU6-1073P-201ENST00000517182 106 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 IGKV2-23-201ENST00000518729 323 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MTCO1P47-201ENST00000523889 1271 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AP000827.1-201ENST00000527814 258 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 OR5D17P-201ENST00000531492 978 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AP004242.1-201ENST00000533701 349 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC068587.4-201ENST00000533893 186 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC063950.1-201ENST00000552036 308 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC016180.1-201ENST00000567945 403 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC034268.2-201ENST00000571784 482 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL031176.1-201ENST00000604554 466 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC092354.2-201ENST00000607786 514 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL590282.1-201ENST00000610379 1136 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MIR7844-201ENST00000616161 122 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC015967.1-201ENST00000619893 476 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC002550.2-201ENST00000621246 394 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC007494.3-201ENST00000624660 743 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC006927.3-201ENST00000638789 384 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 RPS4XP5-202ENST00000449995 1334 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 MFSD8-236ENST00000641509 4050 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 CR383658.2-201ENST00000547576 1525 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RNU6-600P-201ENST00000362524 99 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RNU6-97P-201ENST00000363387 104 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RNU6-1074P-201ENST00000383995 104 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 TPMTP3-201ENST00000411928 735 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 TMSB10P2-201ENST00000416049 131 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AL831737.1-201ENST00000441288 271 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 CDC27P1-201ENST00000445384 715 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 PHBP16-201ENST00000446318 950 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 OR6K1P-201ENST00000456766 971 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RPL23AP62-201ENST00000463396 453 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC104164.2-201ENST00000496953 495 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms