Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNU6-157P-201ENST00000383957 107 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 SNORD65.1-201ENST00000390889 71 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RN7SKP111-201ENST00000410349 271 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 MTND2P18-201ENST00000419962 1030 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC011233.1-201ENST00000422812 283 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 UBE2D3P1-201ENST00000436669 444 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RPS29P7-201ENST00000439662 171 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 UBE2V1P5-201ENST00000440070 405 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 Z99714.1-201ENST00000450463 807 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 NUTF2P7-201ENST00000453086 375 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RPS3AP22-201ENST00000488297 769 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC118282.2-201ENST00000508739 374 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 MRPS33P3-201ENST00000513456 322 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 APOOP4-201ENST00000513530 597 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RN7SKP18-201ENST00000516005 275 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 SCARNA20.6-201ENST00000517251 106 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 PTP4A1P6-201ENST00000531034 478 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 UBE2NP1-201ENST00000545592 458 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC004217.3-201ENST00000551552 878 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RN7SL703P-201ENST00000578485 302 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC040904.1-201ENST00000590850 223 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AL358072.1-201ENST00000604156 575 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC080013.6-201ENST00000606185 215 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AL139418.1-201ENST00000613613 177 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AL392048.1-201ENST00000613946 534 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC099669.2-201ENST00000616549 437 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AC131159.1-201ENST00000621854 213 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 SGO1P1-201ENST00000603525 1447 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC093908.1-201ENST00000623125 8092 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 SNORD3H-201ENST00000384486 214 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 MIR525-201ENST00000384978 85 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 RNU2-65P-201ENST00000410162 185 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 OR51A3P-201ENST00000413596 924 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 PAICSP7-201ENST00000419829 962 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL035423.1-201ENST00000420331 213 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 USP9YP26-201ENST00000421008 661 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 RPL7P2-201ENST00000427639 268 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 MTCO1P3-201ENST00000429327 192 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL445567.1-201ENST00000439121 144 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL133217.1-201ENST00000450980 425 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 ATG12P2-201ENST00000456830 416 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC021146.8-201ENST00000507455 733 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC010486.3-201ENST00000511602 785 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC093755.1-201ENST00000512950 1023 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC118465.1-201ENST00000513820 1271 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 Y_RNA.688-201ENST00000516565 95 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 RN7SKP283-201ENST00000517197 270 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC010306.1-201ENST00000523223 1117 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 IGKV2D-19-201ENST00000523346 262 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 HIGD1AP10-201ENST00000527837 282 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 NBEAP1-201ENST00000554452 979 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC107982.3-201ENST00000584957 985 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 NTAN1P1-201ENST00000603150 646 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AP004247.3-201ENST00000608682 624 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC099778.2-201ENST00000610904 211 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC018926.3-201ENST00000618841 406 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC091903.1-201ENST00000624322 454 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AP003399.1-201ENST00000637534 361 ntBASIC4.04□□□□□ -1.76
UPF2Q9HAU5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.04□□□□□ -1.76
UPF2Q9HAU5 AC026951.1-201ENST00000559530 2459 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms