Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 OSBPL9P3-201ENST00000534523 595 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 GTF3AP2-201ENST00000557014 266 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AL671309.1-201ENST00000603750 544 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC013412.1-201ENST00000610687 192 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC107308.1-201ENST00000615897 301 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC073569.3-201ENST00000619055 682 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AP003400.6-201ENST00000624698 740 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC017104.5-201ENST00000637647 639 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 AC139713.2-210ENST00000641741 992 ntBASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPAP1Q9BWH6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 OR5J1P-201ENST00000313544 939 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 NUP35P2-201ENST00000416748 943 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 RPS15AP40-201ENST00000419621 391 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC093422.3-201ENST00000428506 305 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 MTND4P15-201ENST00000437913 1033 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC000041.1-201ENST00000439655 175 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AL353718.1-201ENST00000451028 517 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC008280.2-201ENST00000455473 307 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC025768.1-201ENST00000510057 267 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 RN7SKP43-201ENST00000516173 320 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 RMST_10.1-201ENST00000616309 154 ntBASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPAP1Q9BWH6 MFSD8-213ENST00000641134 1327 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 MIR181B1-201ENST00000385240 110 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RNA5SP274-201ENST00000410484 108 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 OR2B8P-201ENST00000432841 938 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC011242.1-201ENST00000433596 1158 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC004865.1-201ENST00000442276 1003 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RPL7P59-201ENST00000447700 943 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RPL21P41-201ENST00000459863 264 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RPL31P50-201ENST00000471002 296 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 PRELID3BP6-201ENST00000503839 571 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC010265.1-201ENST00000513509 211 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RN7SKP277-201ENST00000516895 283 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC104229.1-201ENST00000561364 255 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC106734.1-201ENST00000568646 663 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC245100.7-201ENST00000609678 442 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC018926.3-201ENST00000618841 406 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC007318.2-201ENST00000620999 243 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 AC091948.2-201ENST00000636510 279 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 FAM157B-203ENST00000639350 358 ntBASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.6□□□□□ -1.83
RPAP1Q9BWH6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 MAPK10-362ENST00000641864 4484 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 RNU6-1339P-201ENST00000363574 91 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 RPL31P1-201ENST00000398116 372 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 FABP5P3-201ENST00000437960 408 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 RPS17P11-201ENST00000474297 293 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AP004217.1-201ENST00000480579 346 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AC104108.1-201ENST00000509930 412 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 OR8K2P-201ENST00000524645 927 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AC107016.2-201ENST00000547968 190 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 ATP5F1P7-201ENST00000567330 760 ntBASIC3.59□□□□□ -1.83
RPAP1Q9BWH6 AC046144.1-201ENST00000478559 1853 ntBASIC3.59□□□□□ -1.84
RPAP1Q9BWH6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.59□□□□□ -1.84
RPAP1Q9BWH6 NSRP1P1-201ENST00000444067 1693 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms