Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 SNRPEP8-201ENST00000442866 260 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 TIMM8BP2-201ENST00000445940 251 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 Z95327.1-201ENST00000446082 482 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 KF459542.1-201ENST00000450908 553 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 RAD23BP3-201ENST00000454157 1152 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC133473.1-201ENST00000455173 299 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 RNU6-420P-201ENST00000458780 107 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 SNORD121B-201ENST00000458838 81 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 AK3P4-201ENST00000504283 583 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 COX6B1P5-201ENST00000509843 249 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC114781.4-201ENST00000513707 639 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 HIGD1AP3-201ENST00000515857 278 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 RN7SKP260-201ENST00000516907 149 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 RNA5SP337-201ENST00000517007 109 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.07□□□□□ -1.92
LITAFQ99732 AP003072.2-201ENST00000527756 676 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC104383.1-201ENST00000530297 370 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 OR4P1P-201ENST00000530808 1136 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 PTP4A1P6-201ENST00000531034 478 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC009117.1-201ENST00000563948 554 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 MIR5699-201ENST00000578903 90 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC005730.3-201ENST00000583067 366 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC007621.1-201ENST00000604544 437 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AL445222.1-201ENST00000607259 628 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 OR6R2P-201ENST00000609216 300 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC093788.1-201ENST00000609356 927 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 AL590099.1-201ENST00000615276 138 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 AC112204.3-201ENST00000623822 332 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 AC009161.2-201ENST00000624626 138 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 MIR4496-201ENST00000635896 61 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
LITAFQ99732 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LITAFQ99732 LINC00622-201ENST00000562811 1570 ntBASIC3.07□□□□□ -1.92
LITAFQ99732 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LITAFQ99732 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LITAFQ99732 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.07□□□□□ -1.92
LITAFQ99732 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LITAFQ99732 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.07□□□□□ -1.92
LITAFQ99732 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LITAFQ99732 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.06□□□□□ -1.92
LITAFQ99732 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LITAFQ99732 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.06□□□□□ -1.92
LITAFQ99732 RNY1P12-201ENST00000364251 105 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RNU6-1322P-201ENST00000364309 107 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RN7SKP171-201ENST00000364417 303 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RN7SKP275-201ENST00000364626 301 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LITAFQ99732 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 RNU1-63P-201ENST00000383902 164 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 SNORD51-201ENST00000384320 80 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RPS4XP8-201ENST00000402039 771 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RNA5SP306-201ENST00000411087 107 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RPL35AP24-201ENST00000413846 330 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.06□□□□□ -1.92
LITAFQ99732 ZNF90P2-204ENST00000419323 1075 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.06□□□□□ -1.92
LITAFQ99732 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.06□□□□□ -1.92
LITAFQ99732 RPL23AP25-201ENST00000430973 463 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 USP12PX-201ENST00000432383 1057 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 TIMM9P1-201ENST00000436122 256 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 FTH1P1-201ENST00000437933 532 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 HMGB3P12-201ENST00000438745 556 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.06□□□□□ -1.92
LITAFQ99732 NMD3P1-201ENST00000439704 1488 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.06□□□□□ -1.92
LITAFQ99732 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 RPL7L1P1-201ENST00000448259 785 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.06□□□□□ -1.92
LITAFQ99732 FDX1P2-201ENST00000450769 375 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 HMGB3P22-202ENST00000451823 572 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RPL23AP56-201ENST00000460778 453 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LITAFQ99732 AC041039.1-201ENST00000485656 536 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 RPL36AP51-201ENST00000487216 318 ntBASIC3.06□□□□□ -1.92
LITAFQ99732 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.06□□□□□ -1.92
LITAFQ99732 AL139099.1-201ENST00000497398 403 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms