Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MTND4LP14-201ENST00000429447 288 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC005189.1-201ENST00000431286 310 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 RAB11AP1-201ENST00000442978 646 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.9□□□□□ -1.95
VAT1Q99536 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.9□□□□□ -1.95
VAT1Q99536 RPL23AP23-201ENST00000452590 471 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.9□□□□□ -1.95
VAT1Q99536 snoU13.3-201ENST00000459441 104 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 CABYRP1-201ENST00000465493 1045 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.9□□□□□ -1.95
VAT1Q99536 RPL23AP11-201ENST00000475260 469 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VAT1Q99536 AC015724.1-201ENST00000478577 156 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.9□□□□□ -1.95
VAT1Q99536 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.9□□□□□ -1.95
VAT1Q99536 MTND4LP22-201ENST00000508209 276 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 RNA5SP341-201ENST00000516261 117 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.9□□□□□ -1.95
VAT1Q99536 AP000857.1-201ENST00000532151 543 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC093014.1-201ENST00000548926 724 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC025918.2-201ENST00000558683 763 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.9□□□□□ -1.95
VAT1Q99536 MAGOH2P-202ENST00000584384 429 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AC017100.2-201ENST00000584628 355 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.9□□□□□ -1.95
VAT1Q99536 AC012468.1-201ENST00000604888 430 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.9□□□□□ -1.95
VAT1Q99536 AL590282.1-201ENST00000610379 1136 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AL442067.2-201ENST00000614033 363 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AL355493.4-201ENST00000618530 292 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VAT1Q99536 AC022509.4-201ENST00000621404 572 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAT1Q99536 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAT1Q99536 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAT1Q99536 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.9□□□□□ -1.95
VAT1Q99536 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.95
VAT1Q99536 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.9□□□□□ -1.95
VAT1Q99536 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VAT1Q99536 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VAT1Q99536 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VAT1Q99536 RNU6-263P-201ENST00000363811 107 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RNU6-374P-201ENST00000364146 108 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
VAT1Q99536 AL121972.1-201ENST00000402023 252 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RN7SKP123-201ENST00000410732 291 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RNU6-272P-201ENST00000411028 104 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RPL35AP12-201ENST00000425362 338 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 FABP5P3-201ENST00000437960 408 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 HIGD1AP11-201ENST00000438361 280 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC127537.2-201ENST00000439258 465 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
VAT1Q99536 RPS27P5-201ENST00000444247 244 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RPS26P56-201ENST00000444468 240 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 GAPDHP27-201ENST00000447427 1020 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RPL7P59-201ENST00000447700 943 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 MTND5P8-201ENST00000449817 1083 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC140076.1-201ENST00000449897 361 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RPS24P6-201ENST00000452670 400 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 MTND2P6-201ENST00000455337 1030 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 NECAP1P2-201ENST00000455668 727 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 snoU13.24-201ENST00000458998 104 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 RPL21P8-201ENST00000465083 535 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.89□□□□□ -1.95
VAT1Q99536 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.89□□□□□ -1.95
VAT1Q99536 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.89□□□□□ -1.95
VAT1Q99536 RNU6-202P-201ENST00000515998 96 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC022784.5-201ENST00000522241 437 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.89□□□□□ -1.95
VAT1Q99536 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.89□□□□□ -1.95
VAT1Q99536 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.89□□□□□ -1.95
VAT1Q99536 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.89□□□□□ -1.95
VAT1Q99536 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.89□□□□□ -1.95
VAT1Q99536 AC024153.1-201ENST00000603103 365 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AL162274.2-201ENST00000614406 332 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AL109659.3-201ENST00000624985 950 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC092608.3-201ENST00000625017 386 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC084035.1-201ENST00000634543 607 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
VAT1Q99536 AC092593.1-201ENST00000515413 1815 ntBASIC2.89□□□□□ -1.95
VAT1Q99536 AC116096.1-201ENST00000566804 2314 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAT1Q99536 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.88□□□□□ -1.95
VAT1Q99536 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAT1Q99536 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAT1Q99536 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAT1Q99536 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VAT1Q99536 OFD1P18Y-201ENST00000420889 959 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 PNRC2P1-201ENST00000423940 420 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.88□□□□□ -1.95
VAT1Q99536 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.88□□□□□ -1.95
VAT1Q99536 RPS7P2-201ENST00000435134 607 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 MTND1P33-201ENST00000446251 917 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 RPL37P4-201ENST00000448908 268 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 RSL24D1P3-201ENST00000449255 495 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 SSXP4-201ENST00000451349 245 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 NPM1P13-201ENST00000452663 865 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 DNAJC19P8-201ENST00000452887 259 ntBASIC2.88□□□□□ -1.95
VAT1Q99536 RPL21P104-201ENST00000464143 478 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms