Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CR769767.1-201ENST00000436337 346 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 AC021269.2-201ENST00000532318 330 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.02□□□□□ -2.09
SPENQ96T58 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.02□□□□□ -2.09
SPENQ96T58 MIR3199-1-201ENST00000582434 88 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.02□□□□□ -2.09
SPENQ96T58 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.02□□□□□ -2.09
SPENQ96T58 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPENQ96T58 MIR21-201ENST00000362134 72 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 RNY1P10-201ENST00000363268 113 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.02□□□□□ -2.09
SPENQ96T58 RNU2-17P-201ENST00000410290 190 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 RPL7P54-201ENST00000438336 674 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 AC135721.1-201ENST00000497954 479 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 RN7SKP234-201ENST00000517173 224 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.02□□□□□ -2.09
SPENQ96T58 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SPENQ96T58 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPENQ96T58 MUC2-202ENST00000613187 4845 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SPENQ96T58 SNORA41-201ENST00000384675 132 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.02□□□□□ -2.09
SPENQ96T58 RNA5SP380-201ENST00000517190 98 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.02□□□□□ -2.09
SPENQ96T58 MIR6733-201ENST00000635723 61 ntBASIC2.02□□□□□ -2.09
SPENQ96T58 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPENQ96T58 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 FAT1P1-201ENST00000406588 507 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC013410.1-201ENST00000436223 1232 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC009238.1-201ENST00000442165 424 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC009237.6-201ENST00000446969 424 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.01□□□□□ -2.09
SPENQ96T58 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.01□□□□□ -2.09
SPENQ96T58 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.01□□□□□ -2.09
SPENQ96T58 RPS3AP4-201ENST00000555161 764 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.01□□□□□ -2.09
SPENQ96T58 AC011492.1-201ENST00000600023 315 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
SPENQ96T58 MTCO1P22-201ENST00000604619 1360 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SPENQ96T58 EIF5P1-201ENST00000400019 1231 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.01□□□□□ -2.09
SPENQ96T58 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.01□□□□□ -2.09
SPENQ96T58 RNA5SP76-201ENST00000516277 87 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 CKS1BP7-201ENST00000522230 235 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.01□□□□□ -2.09
SPENQ96T58 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AP001542.2-201ENST00000593141 364 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC022960.2-201ENST00000616300 666 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SPENQ96T58 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.01□□□□□ -2.09
SPENQ96T58 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 Y_RNA.178-201ENST00000363832 102 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 Y_RNA.224-201ENST00000364308 111 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPENQ96T58 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.01□□□□□ -2.09
SPENQ96T58 POLR2J4-204ENST00000418424 324 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 RPL23AP14-201ENST00000468281 468 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC147055.1-201ENST00000509261 750 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 SCARNA16.3-201ENST00000516595 184 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC135628.1-201ENST00000568867 534 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC103710.1-201ENST00000610003 901 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AL138820.1-201ENST00000617901 5305 ntBASIC2.01□□□□□ -2.09
SPENQ96T58 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.01□□□□□ -2.09
SPENQ96T58 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SPENQ96T58 THUMPD3P1-201ENST00000506556 1480 ntBASIC2□□□□□ -2.09
SPENQ96T58 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2□□□□□ -2.09
SPENQ96T58 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
SPENQ96T58 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2□□□□□ -2.09
SPENQ96T58 AC005840.1-201ENST00000498412 377 ntBASIC2□□□□□ -2.09
SPENQ96T58 AC126177.3-201ENST00000551839 688 ntBASIC2□□□□□ -2.09
SPENQ96T58 SNORA4-201ENST00000584302 138 ntBASIC2□□□□□ -2.09
SPENQ96T58 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2□□□□□ -2.09
SPENQ96T58 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2□□□□□ -2.09
SPENQ96T58 AC010378.1-201ENST00000619270 362 ntBASIC2□□□□□ -2.09
SPENQ96T58 AL589994.2-201ENST00000621124 579 ntBASIC2□□□□□ -2.09
SPENQ96T58 AC002064.3-201ENST00000623448 346 ntBASIC2□□□□□ -2.09
SPENQ96T58 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
SPENQ96T58 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SPENQ96T58 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SPENQ96T58 RNY1P14-201ENST00000384426 108 ntBASIC2□□□□□ -2.09
SPENQ96T58 RPL31P1-201ENST00000398116 372 ntBASIC2□□□□□ -2.09
SPENQ96T58 AC072039.1-201ENST00000477611 581 ntBASIC2□□□□□ -2.09
SPENQ96T58 OR4A45P-201ENST00000529954 901 ntBASIC2□□□□□ -2.09
SPENQ96T58 NPM1P35-201ENST00000533043 868 ntBASIC2□□□□□ -2.09
SPENQ96T58 RMST_2.1-201ENST00000617263 136 ntBASIC2□□□□□ -2.09
SPENQ96T58 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SPENQ96T58 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC2□□□□□ -2.09
SPENQ96T58 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SPENQ96T58 AC125238.1-201ENST00000448842 249 ntBASIC1.99□□□□□ -2.09
SPENQ96T58 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
SPENQ96T58 LINC00888-204ENST00000487386 421 ntBASIC1.99□□□□□ -2.09
SPENQ96T58 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.99□□□□□ -2.09
SPENQ96T58 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SPENQ96T58 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms