Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC019155.1-201ENST00000382242 574 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL32P23-201ENST00000397237 405 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AL603766.1-201ENST00000407763 664 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 OR51A3P-201ENST00000413596 924 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AL158073.1-201ENST00000426848 1104 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 DNAJC19P7-201ENST00000428811 344 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 IPO7P1-201ENST00000442031 636 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 RPS3AP50-201ENST00000487064 803 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC139783.2-201ENST00000504847 1145 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC007016.1-201ENST00000512110 244 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 KCTD9P2-201ENST00000512203 1013 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC112206.3-201ENST00000514578 389 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AL512310.1-201ENST00000548639 172 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC011611.1-201ENST00000552179 197 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC012507.3-201ENST00000603556 477 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC011816.2-201ENST00000607089 556 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC097468.3-201ENST00000607956 456 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC090425.1-201ENST00000610007 140 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC007792.1-201ENST00000623023 402 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 AC100810.6-201ENST00000638068 285 ntBASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP1Q96SZ6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CDK5RAP1Q96SZ6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDK5RAP1Q96SZ6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
CDK5RAP1Q96SZ6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDK5RAP1Q96SZ6 AC009229.4-201ENST00000623854 1947 ntBASIC4.84□□□□□ -1.64
CDK5RAP1Q96SZ6 CASC19-284ENST00000642142 1868 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC108751.5-201ENST00000492880 1336 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-1066P-201ENST00000363573 105 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.159-201ENST00000363674 87 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 SNORA51.2-201ENST00000364595 132 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 SNORA51.12-201ENST00000384448 134 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR129-1-201ENST00000384972 72 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AL049693.1-201ENST00000402760 611 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC069213.2-201ENST00000420238 366 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC062016.2-201ENST00000420950 676 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 UQCRBP1-201ENST00000421129 336 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AL953862.1-201ENST00000423016 168 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 LSM1P1-201ENST00000438629 273 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 ARL2BPP10-201ENST00000446487 531 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 RPL7P59-201ENST00000447700 943 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 SCARNA10-201ENST00000459255 330 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 MTND5P4-201ENST00000514978 288 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.672-201ENST00000516289 104 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AF186190.1-201ENST00000517470 480 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 DEFB131D-201ENST00000526803 184 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 DNAJC8P1-201ENST00000554535 372 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR4307-201ENST00000582802 84 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC022916.3-201ENST00000592961 742 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AL162413.1-201ENST00000603198 110 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AC007621.1-201ENST00000604544 437 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 AP005019.3-201ENST00000620418 560 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR7703-201ENST00000620784 77 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms