Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PTGES3P3-201ENST00000511479 482 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 RN7SKP13-201ENST00000515933 244 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 OR6C73P-201ENST00000546432 358 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC074051.3-201ENST00000570238 358 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC007566.2-201ENST00000603642 413 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC063944.3-201ENST00000609969 533 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC024257.5-201ENST00000612739 531 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AL442067.2-201ENST00000614033 363 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 MIR7975-201ENST00000619350 68 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC013470.4-201ENST00000619978 986 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC090897.3-201ENST00000636973 1157 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 ELL2P4-201ENST00000446870 1376 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NEK1Q96PY6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEK1Q96PY6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEK1Q96PY6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 DBF4P1-201ENST00000412976 1892 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEK1Q96PY6 RNU6-492P-201ENST00000363035 104 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 OR51AB1P-201ENST00000429046 620 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 USP9YP31-201ENST00000431405 881 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 USP9YP22-201ENST00000438971 294 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC007327.1-201ENST00000447461 264 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 RNU7-170P-201ENST00000459303 61 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC108734.3-201ENST00000481241 1165 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL358832.1-201ENST00000497800 389 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC078918.1-201ENST00000498515 228 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 GMPSP1-201ENST00000514075 579 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 SNORA70.19-201ENST00000516717 90 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 TGIF1P1-201ENST00000558095 802 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 GTF2IP8-201ENST00000560687 584 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AADACP1-206ENST00000561502 1193 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC067852.3-201ENST00000589177 561 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 RNVU1-4-201ENST00000612985 164 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC006963.1-201ENST00000624003 1052 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC098679.5-201ENST00000624394 571 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL512506.2-201ENST00000624472 458 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AC008993.2-201ENST00000631744 806 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NEK1Q96PY6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
NEK1Q96PY6 AL365440.1-201ENST00000436135 2167 ntBASIC4.12□□□□□ -1.75
NEK1Q96PY6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEK1Q96PY6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 RNU6-441P-201ENST00000384545 106 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AL121978.1-201ENST00000402778 359 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 RPS3AP9-201ENST00000417027 792 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 MRPS36P1-201ENST00000421291 307 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 ATP5JP1-201ENST00000431631 322 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 RPL23AP33-201ENST00000442301 452 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 CYCSP35-201ENST00000451978 304 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AL136097.1-201ENST00000456945 913 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC020893.1-201ENST00000502452 580 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 RNF138P1-201ENST00000502765 546 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC093755.1-201ENST00000512950 1023 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 RN7SKP265-201ENST00000516448 223 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 RNU4-60P-201ENST00000517239 135 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC087808.1-201ENST00000520501 361 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AP001189.2-201ENST00000527320 189 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC103843.2-201ENST00000530523 682 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 OR5D17P-201ENST00000531492 978 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 MIR4425-201ENST00000580572 84 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC011471.1-201ENST00000585766 187 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms