Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AL133384.1-201ENST00000412744 351 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RPS3AP9-201ENST00000417027 792 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 RPL36AP36-201ENST00000418616 301 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 Z97055.1-201ENST00000419730 712 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC087650.1-201ENST00000431445 468 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC011742.1-201ENST00000431448 434 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AL139415.2-201ENST00000431968 163 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC109583.1-201ENST00000432156 268 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AL132765.1-201ENST00000434165 553 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RSU1P2-202ENST00000437884 485 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AF228730.2-201ENST00000438784 848 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 CEACAMP9-201ENST00000442990 513 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 SBDSP1-204ENST00000453858 737 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 TMED11P-201ENST00000479478 690 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RPS29P19-201ENST00000479709 171 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC023424.2-201ENST00000493479 777 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC090453.1-201ENST00000495560 436 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 NDUFB5P1-201ENST00000508134 564 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 RN7SKP298-201ENST00000515950 94 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AP000827.1-201ENST00000527814 258 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AP003122.4-201ENST00000530980 758 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC105233.3-201ENST00000531125 744 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 ZNF519P3-201ENST00000557158 1032 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 BNIP3P8-201ENST00000597863 560 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RBM11P1-201ENST00000604951 799 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC090578.1-201ENST00000604955 591 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC128687.2-201ENST00000609657 566 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC022306.2-201ENST00000617563 647 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 OR5AK4P-201ENST00000635912 903 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC099654.13-201ENST00000639774 207 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 OR5H6-203ENST00000642105 978 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNA5SP322-201ENST00000363617 119 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNU6-1279P-201ENST00000383917 103 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNU6-1042P-201ENST00000384204 107 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 Y_RNA.582-201ENST00000391023 95 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AL049697.2-201ENST00000403708 294 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 MIR1179-201ENST00000408703 91 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNU6-195P-201ENST00000411352 109 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 BX295541.1-201ENST00000417774 250 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC091862.1-201ENST00000438016 1100 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 PTMAP6-201ENST00000439110 327 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 RPL7P36-201ENST00000444633 681 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 MTND4P18-201ENST00000447010 465 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 GAPDHP17-201ENST00000449858 1001 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 CEACAMP6-201ENST00000452007 574 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 RPS3AP41-201ENST00000462701 778 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms