Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR124-3-201ENST00000384866 87 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 CCNB2P1-201ENST00000399411 1150 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.68□□□□□ -1.82
USP47Q96K76 AC012498.1-201ENST00000424037 437 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.68□□□□□ -1.82
USP47Q96K76 HMGB1P25-201ENST00000468402 607 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 AC006445.2-201ENST00000510061 472 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.68□□□□□ -1.82
USP47Q96K76 AC093331.1-201ENST00000521474 169 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.68□□□□□ -1.82
USP47Q96K76 CBX3P2-202ENST00000583365 535 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.68□□□□□ -1.82
USP47Q96K76 AL355802.4-201ENST00000607635 548 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.68□□□□□ -1.82
USP47Q96K76 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
USP47Q96K76 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP47Q96K76 AL136964.1-201ENST00000622038 2990 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP47Q96K76 RNA5SP391-201ENST00000363456 119 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 RNU6-98P-201ENST00000384173 107 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 SNORD88.1-201ENST00000408684 91 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 RPL23AP74-201ENST00000437246 471 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
USP47Q96K76 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.67□□□□□ -1.82
USP47Q96K76 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.67□□□□□ -1.82
USP47Q96K76 RPL23AP11-201ENST00000475260 469 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.67□□□□□ -1.82
USP47Q96K76 AC110792.2-201ENST00000510278 224 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 SNORA31.13-201ENST00000516624 135 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 RN7SKP82-201ENST00000516786 223 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 OR5AK3P-201ENST00000527486 1297 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP47Q96K76 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.67□□□□□ -1.82
USP47Q96K76 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.67□□□□□ -1.82
USP47Q96K76 AP001180.3-201ENST00000582221 145 ntBASIC3.67□□□□□ -1.82
USP47Q96K76 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.67□□□□□ -1.82
USP47Q96K76 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.67□□□□□ -1.82
USP47Q96K76 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
USP47Q96K76 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
USP47Q96K76 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 MIR887-201ENST00000401258 79 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 HMGB1P13-201ENST00000406019 642 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 HNRNPDP2-201ENST00000406475 478 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.66□□□□□ -1.82
USP47Q96K76 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.66□□□□□ -1.82
USP47Q96K76 RN7SL330P-201ENST00000469709 307 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 HSPE1P6-201ENST00000479457 291 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.66□□□□□ -1.82
USP47Q96K76 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.66□□□□□ -1.82
USP47Q96K76 AC008413.1-201ENST00000511864 177 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.66□□□□□ -1.82
USP47Q96K76 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP47Q96K76 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.66□□□□□ -1.82
USP47Q96K76 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.66□□□□□ -1.82
USP47Q96K76 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
USP47Q96K76 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.66□□□□□ -1.82
USP47Q96K76 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.66□□□□□ -1.82
USP47Q96K76 AC083899.3-201ENST00000603413 594 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.66□□□□□ -1.82
USP47Q96K76 AC004832.5-201ENST00000608677 401 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
USP47Q96K76 DCAF13P3-201ENST00000561147 1334 ntBASIC3.66□□□□□ -1.82
USP47Q96K76 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.66□□□□□ -1.82
USP47Q96K76 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
USP47Q96K76 AC138915.3-201ENST00000562908 1389 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
USP47Q96K76 SNORD62.1-201ENST00000362541 86 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 MTATP6P31-201ENST00000406985 692 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.65□□□□□ -1.82
USP47Q96K76 NDUFB4P5-201ENST00000415445 361 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 AC010095.1-201ENST00000443543 144 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 ARL5AP2-201ENST00000444698 533 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 RPL9P33-201ENST00000484311 566 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.65□□□□□ -1.82
USP47Q96K76 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.65□□□□□ -1.82
USP47Q96K76 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.65□□□□□ -1.82
USP47Q96K76 AC004923.2-201ENST00000529649 369 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
USP47Q96K76 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.65□□□□□ -1.82
USP47Q96K76 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.65□□□□□ -1.82
USP47Q96K76 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.65□□□□□ -1.82
USP47Q96K76 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.65□□□□□ -1.82
USP47Q96K76 AP003117.2-201ENST00000606010 545 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.82
USP47Q96K76 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.65□□□□□ -1.83
USP47Q96K76 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.65□□□□□ -1.83
USP47Q96K76 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
USP47Q96K76 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.64□□□□□ -1.83
USP47Q96K76 MIR1303-201ENST00000408625 86 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 RPLP0P7-201ENST00000416050 667 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 RPL7P53-201ENST00000421245 739 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.64□□□□□ -1.83
USP47Q96K76 AL390023.1-201ENST00000428836 262 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 TRIM60P13-201ENST00000432350 1283 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.64□□□□□ -1.83
USP47Q96K76 RPL7P29-201ENST00000437151 728 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 AC011816.1-201ENST00000441346 546 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 UBL5P3-201ENST00000475112 231 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms