Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC090607.5-201ENST00000615692 224 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 ZNF807-201ENST00000328088 1707 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 RNU6-960P-201ENST00000364056 120 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 RNU6-601P-201ENST00000384540 107 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL360182.1-201ENST00000397433 468 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 OR3A2-201ENST00000408891 1076 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 RNA5SP107-201ENST00000411358 122 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 RPL23AP38-201ENST00000423801 469 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL591212.2-201ENST00000433923 257 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 RPL36AP13-201ENST00000457490 317 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 MIR2053-201ENST00000459295 91 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC002456.2-201ENST00000509356 380 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC026801.2-201ENST00000515352 425 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 FTH1P11-201ENST00000517577 551 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AP000676.2-201ENST00000529711 301 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 MTCO3P23-201ENST00000561363 289 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL589674.2-201ENST00000604304 337 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC012443.1-201ENST00000605605 231 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL008729.2-201ENST00000606393 473 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC098657.3-201ENST00000620434 263 ntBASIC5.81□□□□□ -1.48
IFT43Q96FT9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT43Q96FT9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
IFT43Q96FT9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
IFT43Q96FT9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 ZNF734P-201ENST00000419494 1534 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 API5P2-201ENST00000397055 1498 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RNU6-1115P-201ENST00000362490 106 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RNU6-188P-201ENST00000364207 107 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RNVU1-3-201ENST00000364313 161 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 SNORD116-11-201ENST00000383882 92 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RNU6-1040P-201ENST00000383974 107 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RNU6-310P-201ENST00000384655 107 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 HMGB3P2-201ENST00000411913 584 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 SNORD97-201ENST00000459187 142 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC022215.1-201ENST00000481770 362 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RN7SL570P-201ENST00000484405 292 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 RPL32P33-201ENST00000487023 394 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 DUTP1-201ENST00000493631 470 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC015911.1-201ENST00000495111 156 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms