Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CDK8P2-201ENST00000415020 547 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 RPL31P45-201ENST00000419532 356 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 RPL21P32-201ENST00000419877 477 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 EIF1P3-201ENST00000423841 334 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AL691449.1-201ENST00000426570 421 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 MTND1P28-201ENST00000435623 950 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AL592447.1-201ENST00000447592 540 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 SUMO2P2-201ENST00000456482 255 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AL139099.1-201ENST00000497398 403 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC005798.1-201ENST00000513715 387 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 RN7SKP234-201ENST00000517173 224 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 SNORA70.24-201ENST00000517233 118 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 IGHV3-32-201ENST00000519182 355 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 MTND4LP18-201ENST00000526864 291 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 MIR4458-201ENST00000578872 75 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC079089.3-201ENST00000603094 673 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AP002360.3-201ENST00000607673 710 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AP006248.2-201ENST00000623309 592 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC006378.2-201ENST00000623178 2476 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 AC100778.3-201ENST00000580060 1750 ntBASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM43Q96BQ3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 DCAF13P1-201ENST00000495256 1330 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 RNU5E-5P-201ENST00000365379 116 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 Y_RNA.359-201ENST00000365498 102 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 MIR30B-201ENST00000384850 88 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 MIR1250-201ENST00000408098 113 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 MTCO1P17-201ENST00000411522 491 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 TBCAP1-201ENST00000436520 327 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC127537.2-201ENST00000439258 465 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC092641.1-201ENST00000440229 772 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 RPL7P31-201ENST00000450192 724 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 HMGB1P15-201ENST00000453854 435 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 FABP5P5-201ENST00000515537 406 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 RNA5SP446-201ENST00000515955 82 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 RNU1-95P-201ENST00000516357 160 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 RNU1-128P-201ENST00000516704 160 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AP003033.1-201ENST00000527244 415 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AP002453.2-201ENST00000533503 320 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 MIR4307-201ENST00000582802 84 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AL592436.1-201ENST00000605135 558 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 COX6CP4-201ENST00000605798 228 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 Z98200.1-201ENST00000607298 470 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC009509.4-201ENST00000619202 509 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 NUP58P1-201ENST00000502546 1738 ntBASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM43Q96BQ3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms