Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AL732372.2-225ENST00000642124 456 ntBASIC4.13□□□□□ -1.75
SMARCE1Q969G3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCE1Q969G3 SGO1P2-201ENST00000429458 1589 ntBASIC4.13□□□□□ -1.75
SMARCE1Q969G3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCE1Q969G3 GDI2P1-201ENST00000429312 1336 ntBASIC4.13□□□□□ -1.75
SMARCE1Q969G3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCE1Q969G3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.13□□□□□ -1.75
SMARCE1Q969G3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC024560.2-201ENST00000507981 1497 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 RN7SKP285-201ENST00000410137 318 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 RNA5SP56-201ENST00000410277 118 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 SNORA57.3-201ENST00000411095 141 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 PTP4A1P5-201ENST00000420305 455 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC006989.1-201ENST00000427212 131 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 RPS27AP12-201ENST00000429552 465 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 RPL21P89-201ENST00000444021 467 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 MRPS31P2-201ENST00000451581 518 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AL109741.2-201ENST00000455561 343 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AL136097.1-201ENST00000456945 913 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 UBDP1-202ENST00000457888 382 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 RPL9P32-201ENST00000464118 620 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 NCOR1P1-202ENST00000486162 291 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 RPS3AP50-201ENST00000487064 803 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC093281.2-201ENST00000510153 597 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 CYCSP30-201ENST00000546447 172 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC107954.1-201ENST00000565906 727 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC008751.2-201ENST00000597885 980 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 BNIP3P11-201ENST00000603878 563 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AL136981.2-201ENST00000617319 734 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC091304.6-201ENST00000619761 202 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC131159.1-201ENST00000621854 213 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 AC231657.1-201ENST00000624313 397 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 NUP58P1-201ENST00000502546 1738 ntBASIC4.12□□□□□ -1.75
SMARCE1Q969G3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCE1Q969G3 MTND5P3-201ENST00000438536 1800 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC026951.1-201ENST00000559530 2459 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 RNU6-761P-201ENST00000384148 107 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 U3.29-201ENST00000391296 212 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL121972.1-201ENST00000402023 252 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 MIR1250-201ENST00000408098 113 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 MTCYBP38-201ENST00000417160 1123 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL953862.1-201ENST00000423016 168 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 CETN4P-201ENST00000432407 469 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 OR4C10P-201ENST00000434991 931 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 YWHAZP7-201ENST00000436906 631 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 TXNP1-201ENST00000441872 371 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL606662.1-201ENST00000445763 553 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC097493.1-201ENST00000463958 372 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC010460.1-201ENST00000507087 466 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AP000926.4-201ENST00000527351 454 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL139174.1-201ENST00000531489 886 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 MIR4999-201ENST00000585029 91 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AL669831.4-202ENST00000590817 238 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 VN1R90P-201ENST00000595717 726 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC021171.1-201ENST00000603137 706 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC025588.4-201ENST00000615802 908 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AC097655.1-201ENST00000635075 318 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 AP000553.6-201ENST00000641242 118 ntBASIC4.11□□□□□ -1.75
SMARCE1Q969G3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms