Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 EIF1P3-201ENST00000423841 334 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO1P20-201ENST00000425366 358 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 TIMM9P3-201ENST00000428659 274 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AL356276.2-201ENST00000435919 558 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC239367.2-201ENST00000447309 705 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 RPS27AP15-201ENST00000447672 466 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AL035407.2-201ENST00000454090 378 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO3P11-201ENST00000455103 774 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 ARPC3P2-201ENST00000457786 533 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC092757.1-201ENST00000467293 467 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC007537.2-201ENST00000472093 511 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-430P-201ENST00000517078 107 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC008802.1-201ENST00000519121 791 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 OR4C2P-201ENST00000530855 1064 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC006064.5-201ENST00000541782 248 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC093012.1-202ENST00000549403 582 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MIR548Y-201ENST00000582739 110 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AP004607.9-201ENST00000618202 316 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AC112484.5-201ENST00000624189 228 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MAPK10-286ENST00000641208 8747 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-738P-201ENST00000384531 106 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AL117339.2-201ENST00000430475 180 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC005002.1-201ENST00000447458 540 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 RPL23AP35-201ENST00000451906 501 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AP000797.1-201ENST00000478870 387 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 FAM172BP-201ENST00000487497 1089 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC026427.2-201ENST00000506228 536 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC107918.3-201ENST00000533272 382 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 CYCSP28-201ENST00000534284 321 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 OR8R1P-201ENST00000543943 764 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC020914.6-201ENST00000594327 272 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AC090525.3-201ENST00000605601 189 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AL590282.1-201ENST00000610379 1136 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 MIR7973-1-201ENST00000614683 76 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AL161637.1-201ENST00000622380 412 ntBASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF3Q8TEJ3 EOGT-210ENST00000615922 1931 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 MAPK10-303ENST00000641324 3959 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RNU5F-6P-201ENST00000362979 116 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RN7SKP224-201ENST00000364140 325 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RN7SKP280-201ENST00000364196 304 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 SNORA62.2-201ENST00000364672 152 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO3P12-201ENST00000416718 547 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC092647.1-201ENST00000420654 287 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL158073.1-201ENST00000426848 1104 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC234064.1-201ENST00000436312 247 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms