Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MIR4999-201ENST00000585029 91 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AC106791.2-201ENST00000604680 391 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AC114878.2-201ENST00000604863 1251 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AP002907.1-201ENST00000606361 1430 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 U3.45-201ENST00000607547 219 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AC004943.3-201ENST00000624116 600 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP38Q8NB14 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP38Q8NB14 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP38Q8NB14 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
USP38Q8NB14 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.41□□□□□ -1.7
USP38Q8NB14 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USP38Q8NB14 RNU6-931P-201ENST00000363850 107 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP38Q8NB14 AL049545.1-201ENST00000401856 572 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.41□□□□□ -1.7
USP38Q8NB14 MIR1250-201ENST00000408098 113 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC245052.5-201ENST00000416320 649 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.41□□□□□ -1.7
USP38Q8NB14 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC011742.1-201ENST00000431448 434 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.41□□□□□ -1.7
USP38Q8NB14 MTND4P6-201ENST00000438297 472 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 MTND2P19-201ENST00000449129 1012 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.41□□□□□ -1.7
USP38Q8NB14 TRGVB-201ENST00000453257 471 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 RNU7-125P-201ENST00000458760 62 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 MRPS33P3-201ENST00000513456 322 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 RNU6-1129P-201ENST00000515964 104 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 IGKV2-38-201ENST00000517443 247 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.41□□□□□ -1.7
USP38Q8NB14 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AL360157.1-201ENST00000565962 87 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC012417.1-201ENST00000582307 1039 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 MIR4637-201ENST00000582405 84 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC112220.3-201ENST00000605502 502 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC124312.4-201ENST00000605533 310 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AL354976.1-201ENST00000613843 387 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AL713922.2-201ENST00000619384 716 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC022079.1-201ENST00000621546 602 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 C2orf27A-204ENST00000623058 969 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.41□□□□□ -1.7
USP38Q8NB14 AC079228.1-201ENST00000624774 1049 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USP38Q8NB14 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.41□□□□□ -1.7
USP38Q8NB14 MARK2P15-201ENST00000432204 2186 ntBASIC4.41□□□□□ -1.7
USP38Q8NB14 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP38Q8NB14 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP38Q8NB14 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP38Q8NB14 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP38Q8NB14 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.4□□□□□ -1.7
USP38Q8NB14 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP38Q8NB14 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USP38Q8NB14 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USP38Q8NB14 RNU6-356P-201ENST00000384140 107 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AL121972.1-201ENST00000402023 252 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 RPL31P2-201ENST00000413849 377 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 RPL31P45-201ENST00000419532 356 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.4□□□□□ -1.71
USP38Q8NB14 RPL23AP33-201ENST00000442301 452 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 PABPC1P3-201ENST00000469174 459 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 RPL21P103-201ENST00000479921 488 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.4□□□□□ -1.71
USP38Q8NB14 FAM172BP-201ENST00000487497 1089 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC108078.3-201ENST00000502633 489 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 HSPD1P15-201ENST00000505573 1122 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 RNU6-150P-201ENST00000516237 95 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AL139174.1-201ENST00000531489 886 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.4□□□□□ -1.71
USP38Q8NB14 RPL23AP87-202ENST00000573039 466 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.4□□□□□ -1.71
USP38Q8NB14 BNIP3P24-201ENST00000593398 557 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AL137843.1-201ENST00000605078 385 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC018638.7-201ENST00000605836 1114 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC116312.1-201ENST00000606841 314 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms