Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 RPS4XP5-202ENST00000449995 1334 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 RPS3AP36-201ENST00000398190 775 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 Y_RNA.608-201ENST00000410647 95 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC073264.1-201ENST00000411508 416 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 EIF4HP2-201ENST00000424380 563 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 RPL7P2-201ENST00000427639 268 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 ELOCP14-201ENST00000428070 331 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC022022.1-201ENST00000430304 178 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 ELOCP7-201ENST00000439968 331 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL162151.2-201ENST00000448875 158 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL590365.1-201ENST00000450788 243 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 NDUFA5P7-201ENST00000452914 242 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 BX322784.1-201ENST00000455793 1077 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 MTND1P11-201ENST00000456661 876 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC013828.1-201ENST00000481845 158 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 RPS3AP14-201ENST00000483907 780 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 HMGB1P19-201ENST00000517578 577 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC137800.2-201ENST00000574375 120 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 CYCSP40-201ENST00000575927 294 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 MIR544B-201ENST00000582372 78 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 BPIFA4P-203ENST00000603168 689 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC024220.1-201ENST00000603675 484 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL590282.1-201ENST00000610379 1136 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 MIR6875-201ENST00000617506 72 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AC068880.5-201ENST00000624331 290 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL359697.1-201ENST00000624879 587 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL596275.2-204ENST00000641628 552 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 AL596275.2-206ENST00000641957 626 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 VPS35P1-201ENST00000563400 1518 ntBASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 MTND4P12-201ENST00000498999 1377 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 Y_RNA.89-201ENST00000363031 102 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 SNORA70.4-201ENST00000365509 134 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-533P-201ENST00000384144 107 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 RNU4-55P-201ENST00000410731 137 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 CYCSP19-201ENST00000411715 316 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 RPL6P29-201ENST00000414863 865 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AL358934.1-201ENST00000432346 324 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC079448.1-201ENST00000449377 373 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 RPS15AP1-201ENST00000457423 391 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC087312.1-201ENST00000471411 480 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC023598.1-201ENST00000472521 361 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC090686.1-201ENST00000481577 749 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 POU5F1P7-201ENST00000508759 541 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC026412.2-201ENST00000512270 1075 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AP000790.1-201ENST00000528891 737 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AP003122.4-201ENST00000530980 758 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AL157687.1-201ENST00000554853 619 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms