Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 AC099654.2-201ENST00000433031 1980 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.87□□□□□ -1.63
TRIM48Q8IWZ4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 Y_RNA.394-201ENST00000383942 103 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-74P-201ENST00000384235 107 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 U3.20-201ENST00000390909 217 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC004987.3-201ENST00000413879 771 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC127526.1-201ENST00000417526 366 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 RPS29P9-201ENST00000440360 171 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 RPS4XP10-201ENST00000465034 731 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 MTCO2P29-201ENST00000465212 189 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC063943.1-201ENST00000465434 453 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC021382.1-201ENST00000483523 359 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 RN7SL441P-201ENST00000492388 296 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 EIF4EP3-201ENST00000498782 656 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC026427.2-201ENST00000506228 536 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 MTCO3P9-201ENST00000506989 781 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC117522.3-201ENST00000507974 584 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC110792.2-201ENST00000510278 224 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 RNU7-30P-201ENST00000516835 62 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 BTF3P12-201ENST00000519620 469 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC105029.1-201ENST00000520250 669 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC107953.1-201ENST00000522216 297 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC012339.2-201ENST00000523996 453 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 MIR4480-201ENST00000582492 71 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 FAM25E-202ENST00000608562 189 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC011460.1-201ENST00000636268 1834 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 AC006020.1-201ENST00000420179 1854 ntBASIC4.86□□□□□ -1.63
TRIM48Q8IWZ4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 OR1S2-201ENST00000302592 978 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RNU5E-8P-201ENST00000363502 116 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RNY3P13-201ENST00000365542 102 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-39P-201ENST00000384344 107 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 MIR585-201ENST00000384887 94 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RPL21P67-201ENST00000402896 478 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 COX5BP7-201ENST00000414780 274 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RPL34P6-201ENST00000432390 345 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 TIMM9P1-201ENST00000436122 256 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 FTH1P1-201ENST00000437933 532 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC127537.2-201ENST00000439258 465 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RNA5SP103-201ENST00000459503 118 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC103851.1-201ENST00000506833 274 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC016559.2-201ENST00000510759 359 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC016065.2-201ENST00000514530 444 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC112206.3-201ENST00000514578 389 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-410P-201ENST00000517006 107 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 SUB1P1-201ENST00000524415 382 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AP003072.2-201ENST00000527756 676 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AL031320.1-201ENST00000604177 357 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC087783.2-201ENST00000605070 562 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AP001521.2-201ENST00000608772 546 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AL596245.1-201ENST00000618994 362 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC009248.2-201ENST00000619826 254 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC087385.3-201ENST00000620477 187 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 RMST_7.1-201ENST00000621935 268 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 AC091953.3-201ENST00000623220 236 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms