Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RPL31P54-201ENST00000429803 370 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RPL21P133-201ENST00000443666 476 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RPL17P49-201ENST00000443728 411 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AL592437.1-201ENST00000443781 492 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RPL21P23-201ENST00000446654 460 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RPL26P28-201ENST00000451325 435 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC010285.1-201ENST00000470580 392 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 CYB5AP5-201ENST00000549779 389 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 LSM6P2-201ENST00000552208 177 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RPAP2P1-201ENST00000603626 1168 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC019176.2-201ENST00000611579 315 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC243312.2-201ENST00000623340 601 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 RPL23AP57-201ENST00000332361 466 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 Y_RNA.126-201ENST00000363382 111 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-1181P-201ENST00000384191 106 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AL355615.1-201ENST00000406187 641 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC109780.2-201ENST00000413467 845 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 FCF1P2-201ENST00000415284 583 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 HSPE1P1-201ENST00000421494 318 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 OR2B8P-201ENST00000432841 938 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 GOT2P5-201ENST00000433995 546 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC092641.1-201ENST00000440229 772 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 HMGB1P15-201ENST00000453854 435 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC118282.1-201ENST00000506408 765 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 RNU1-61P-201ENST00000516107 151 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 RNA5SP135-201ENST00000517019 125 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC023632.4-201ENST00000517783 191 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 GAS5-AS1-201ENST00000602767 694 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AL121772.2-201ENST00000614331 297 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 VN1R7P-201ENST00000619242 903 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC006963.1-201ENST00000624003 1052 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 AC139713.2-210ENST00000641741 992 ntBASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NUDCD3Q8IVD9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 API5P2-201ENST00000397055 1498 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 SNORA5A-201ENST00000384111 134 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC110754.1-201ENST00000399740 601 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AL023807.1-201ENST00000407932 359 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC027644.1-201ENST00000419595 298 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RPL21P40-201ENST00000428586 483 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC005345.1-201ENST00000431868 217 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 MTCYBP15-201ENST00000433123 1127 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC122718.1-201ENST00000439448 744 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RPL7P15-201ENST00000461190 712 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 HMGB1P25-201ENST00000468402 607 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC108860.1-201ENST00000484521 383 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms