Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MTCO3P2-201ENST00000457365 171 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RPL21P103-201ENST00000479921 488 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC106707.2-201ENST00000484182 374 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC008837.2-201ENST00000513076 418 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 MTCO1P30-201ENST00000515244 580 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RN7SKP31-201ENST00000516354 278 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RN7SKP60-201ENST00000516985 239 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC005832.3-201ENST00000537929 631 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 LSM6P2-201ENST00000552208 177 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 TRAV15-201ENST00000556680 249 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 SULT1C2P1-202ENST00000562418 459 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC007566.2-201ENST00000603642 413 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC091946.2-201ENST00000606105 291 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 MFSD8-236ENST00000641509 4050 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RIOK3P1-201ENST00000418778 1528 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC058791.1-201ENST00000608412 3198 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RNU4-28P-201ENST00000364739 141 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 MIR183-201ENST00000384958 110 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 MIR506-201ENST00000384998 124 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RPL7P60-201ENST00000397636 735 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AL133384.1-201ENST00000412744 351 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AL161449.1-201ENST00000414531 1199 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 ELOCP9-201ENST00000418624 239 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 HMGB1P49-201ENST00000418882 569 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 SDCBPP2-201ENST00000424643 885 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RPL23AP16-201ENST00000441715 421 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 TXNP1-201ENST00000441872 371 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 PTENP1-201ENST00000447117 1215 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 HMGB3P8-201ENST00000449709 577 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC084357.1-201ENST00000473404 255 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC010301.1-201ENST00000473936 355 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RN7SL293P-201ENST00000481765 281 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 RN7SKP18-201ENST00000516005 275 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 MTCO2P15-201ENST00000532655 656 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 CENPUP2-201ENST00000555897 1186 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC006960.3-201ENST00000561845 705 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AL132657.2-201ENST00000564417 358 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC138915.2-201ENST00000569776 97 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 MIR5187-201ENST00000583479 76 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC092954.1-201ENST00000609121 445 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC107075.1-201ENST00000613695 314 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC013470.4-201ENST00000619978 986 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CCDC71Q8IV32 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 AC109315.1-201ENST00000584143 1347 ntBASIC3.37□□□□□ -1.87
CCDC71Q8IV32 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC091152.2-201ENST00000591628 2569 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 RNU5D-1-201ENST00000363299 116 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 Y_RNA.465-201ENST00000384293 102 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 MIR153-1-201ENST00000384914 90 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 RNU2-42P-201ENST00000410697 113 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 RPL31P45-201ENST00000419532 356 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms