Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AP001636.2-201ENST00000525517 696 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC006130.2-201ENST00000586202 326 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AL109618.2-201ENST00000605527 211 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC024060.1-201ENST00000607052 494 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AL357559.1-201ENST00000622228 274 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC010872.1-201ENST00000624225 675 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AL138960.2-201ENST00000625145 535 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 SGO1P2-201ENST00000429458 1589 ntBASIC3.21□□□□□ -1.89
NIPAL3Q6P499 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 ZNF285B-201ENST00000561698 1767 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RIOK3P1-201ENST00000418778 1528 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AL353746.1-201ENST00000566293 6881 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RNA5SP124-201ENST00000362739 110 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RNU5D-1-201ENST00000363299 116 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 MIR134-201ENST00000385258 73 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AL355143.1-201ENST00000407101 841 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC068533.1-201ENST00000418542 415 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 GTF2IP23-201ENST00000423746 351 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 USP9YP31-201ENST00000431405 881 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC122718.1-201ENST00000439448 744 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RNF2P1-201ENST00000442955 1010 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RPL39P6-201ENST00000448289 150 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 USP9YP34-201ENST00000453983 808 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RNU7-170P-201ENST00000459303 61 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC010401.1-201ENST00000463867 348 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 FAM133DP-201ENST00000464802 691 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RPS23P3-201ENST00000470993 430 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 ST13P14-201ENST00000474095 734 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC017015.1-201ENST00000477387 286 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC020893.1-201ENST00000502452 580 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 MTCYBP16-201ENST00000509187 1129 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RN7SKP18-201ENST00000516005 275 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RNU6-1095P-201ENST00000516148 108 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 DUXAP6-201ENST00000553858 601 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 FAM60BP-201ENST00000578364 658 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AL390240.1-201ENST00000612950 384 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC123767.1-202ENST00000620407 817 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AL049777.1-201ENST00000622740 518 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 AC104985.3-201ENST00000623479 597 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 OR1S1-201ENST00000624470 978 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NIPAL3Q6P499 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.21□□□□□ -1.9
NIPAL3Q6P499 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 RNU6-216P-201ENST00000363282 104 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 snoZ40.1-201ENST00000364540 72 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL591034.1-201ENST00000407447 340 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 Z75741.2-201ENST00000417272 1167 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 MRPS36P1-201ENST00000421291 307 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms