Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 RNU6-623P-201ENST00000363143 105 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 Y_RNA.559-201ENST00000384686 107 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 CCNG1P1-201ENST00000406783 885 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AF186996.5-201ENST00000418098 904 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 RPL21P32-201ENST00000419877 477 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 EIF1P3-201ENST00000423841 334 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC104837.2-201ENST00000427236 424 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 BX890604.2-201ENST00000427883 474 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC090774.1-201ENST00000435925 246 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL049734.2-201ENST00000441066 616 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SSXP1-201ENST00000453640 473 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SCARNA10-201ENST00000459255 330 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SNORD42A-201ENST00000459584 64 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC112204.1-201ENST00000502591 103 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 ARL2BPP4-201ENST00000506854 471 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AP000676.2-201ENST00000529711 301 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC105233.3-201ENST00000531125 744 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 MED28P6-201ENST00000558776 231 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 MTND6P33-201ENST00000571794 183 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 MIR3934-201ENST00000579806 107 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC060771.1-201ENST00000582031 164 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC009977.1-201ENST00000586015 570 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC011487.3-201ENST00000593607 453 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 Mico1.1-201ENST00000611698 204 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC009268.2-201ENST00000621925 457 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 Z82217.1-201ENST00000625157 8149 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC106871.1-201ENST00000568324 3102 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 AC008725.1-201ENST00000605123 2263 ntBASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
PPP4R4Q6NUP7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AC067945.1-201ENST00000342609 618 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RNA5SP428-201ENST00000365129 132 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 ARL4AP5-201ENST00000404372 599 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RNA5SP129-201ENST00000410276 118 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RN7SKP235-201ENST00000410662 305 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 CHEK2P3-201ENST00000416118 248 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AL590762.4-201ENST00000425885 253 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 MTATP6P4-201ENST00000427725 675 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RHOT1P3-201ENST00000436571 331 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AC112498.1-201ENST00000444401 332 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 HMGN2P7-201ENST00000456186 273 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RPS26P28-201ENST00000470806 348 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RPL23AP72-201ENST00000492447 435 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 AC108022.1-201ENST00000493466 478 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 NIPA2P2-201ENST00000496376 1083 ntBASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PPP4R4Q6NUP7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms