Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC008957.3-201ENST00000624112 2242 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 Y_RNA.412-201ENST00000384001 104 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 SNORD78.2-201ENST00000391076 69 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 RPL36P18-201ENST00000419316 318 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 UQCRBP2-201ENST00000447827 297 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 AL353691.1-201ENST00000451332 387 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 RN7SL714P-201ENST00000487050 298 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 KHDC1P1-201ENST00000511053 508 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 SNORA27.4-201ENST00000516650 95 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 DNAJC19P2-201ENST00000593340 302 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC243654.2-201ENST00000612843 443 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC062029.1-202ENST00000606164 3651 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC007406.5-201ENST00000570140 3170 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 AL137003.2-201ENST00000606924 2538 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 Y_RNA.542-201ENST00000384641 111 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 MIR190B-201ENST00000401119 79 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 CYCSP43-201ENST00000438233 310 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 MTCO1P44-201ENST00000441935 243 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 RPS27AP9-201ENST00000477681 438 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC006539.1-201ENST00000481419 501 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 RNU5E-3P-201ENST00000515913 68 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 MIR4701-201ENST00000583094 63 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 OR1M4P-201ENST00000589199 287 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC005332.4-201ENST00000592752 579 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC011476.5-201ENST00000615594 130 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AL589994.2-201ENST00000621124 579 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 AC010624.4-201ENST00000597606 1351 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AL359976.1-201ENST00000418655 3528 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.78□□□□□ -1.32
VARS2Q5ST30 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 AL592148.3-201ENST00000608771 2646 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 ZNF826P-207ENST00000622273 1910 ntBASIC6.78□□□□□ -1.32
VARS2Q5ST30 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARS2Q5ST30 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.77□□□□□ -1.32
VARS2Q5ST30 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
VARS2Q5ST30 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
VARS2Q5ST30 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
VARS2Q5ST30 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
VARS2Q5ST30 MAPK10-344ENST00000641718 3746 ntBASIC6.77□□□□□ -1.33
VARS2Q5ST30 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
VARS2Q5ST30 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VARS2Q5ST30 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
VARS2Q5ST30 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VARS2Q5ST30 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
VARS2Q5ST30 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VARS2Q5ST30 Y_RNA.75-201ENST00000362927 97 ntBASIC6.77□□□□□ -1.33
VARS2Q5ST30 RNU6-653P-201ENST00000363074 106 ntBASIC6.77□□□□□ -1.33
VARS2Q5ST30 RNU6-1284P-201ENST00000363701 100 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms