Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC004925.1-201ENST00000624256 2706 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 OR5P1P-201ENST00000299512 925 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 RNU6-97P-201ENST00000363387 104 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 RNU6-501P-201ENST00000364072 100 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 RNA5SP235-201ENST00000365411 114 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 SNORD116-2-201ENST00000384274 95 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 RNU6-1207P-201ENST00000384343 107 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 SNORD116-6-201ENST00000384711 96 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 RPL36AP36-201ENST00000418616 301 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 AL356387.2-201ENST00000422272 243 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 RPS27AP7-201ENST00000422792 455 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC009480.2-201ENST00000422916 432 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 MED14P1-201ENST00000430517 648 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 RPL21P112-201ENST00000434403 463 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AL512286.1-201ENST00000439244 400 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 HMGB1P22-201ENST00000505315 124 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC013444.2-201ENST00000603317 787 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 AL034351.1-201ENST00000605288 668 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 MIR7702-201ENST00000621931 59 ntBASIC4.35□□□□□ -1.71
CCDC38Q502W7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC38Q502W7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC38Q502W7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC38Q502W7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC38Q502W7 RPS3AP23-201ENST00000401762 784 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 TPMTP3-201ENST00000411928 735 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 PGBD4P8-201ENST00000412993 562 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 TOMM22P1-201ENST00000418578 312 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 AC068287.1-201ENST00000430283 295 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 ISCA1P2-201ENST00000438679 421 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 MTND1P30-201ENST00000441241 901 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 CDC27P1-201ENST00000445384 715 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 ZNF114P1-201ENST00000453500 292 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 OR6K1P-201ENST00000456766 971 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC38Q502W7 BNIP3P41-201ENST00000503774 571 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 AC020593.1-201ENST00000507399 299 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC38Q502W7 SNORA31.20-201ENST00000517111 133 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 NARSP2-201ENST00000518524 679 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 MED28P5-201ENST00000528254 438 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 AC068831.4-201ENST00000556118 109 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 MIR4715-201ENST00000584117 79 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC38Q502W7 VN1R79P-201ENST00000593540 513 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 MIR486-1-201ENST00000612171 68 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 AL590099.1-201ENST00000615276 138 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC38Q502W7 AP001486.2-201ENST00000561652 5113 ntBASIC4.34□□□□□ -1.71
CCDC38Q502W7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC38Q502W7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC38Q502W7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC38Q502W7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC38Q502W7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC38Q502W7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC38Q502W7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC38Q502W7 AC006378.2-201ENST00000623178 2476 ntBASIC4.33□□□□□ -1.72
CCDC38Q502W7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC38Q502W7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC38Q502W7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms