Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC134882.1-201ENST00000603738 1676 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC002525.1-201ENST00000624392 1622 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 PABPC1P6-201ENST00000445594 1829 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC024587.1-201ENST00000505925 2157 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 Y_RNA.48-201ENST00000362710 103 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RNU6-1266P-201ENST00000362794 105 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RNA5SP478-201ENST00000364657 115 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RNU6-95P-201ENST00000384697 107 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RNU6-1168P-201ENST00000390831 104 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AL356421.1-201ENST00000403255 413 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RN7SKP51-201ENST00000410781 304 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AL158071.1-201ENST00000430315 461 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RPL23AP25-201ENST00000430973 463 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 HMGN3P1-201ENST00000453847 193 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC245028.2-201ENST00000458673 253 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 NDUFB5P1-201ENST00000508134 564 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 IGKV2-38-201ENST00000517443 247 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 HMGN1P28-201ENST00000521340 364 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 DYNLL1P4-201ENST00000549314 266 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 HSPE1P2-201ENST00000554777 306 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 FKBP1AP1-201ENST00000594588 318 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AL355877.2-201ENST00000603670 358 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 HMGN2P28-201ENST00000606102 262 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AL021918.2-201ENST00000613415 194 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AL137067.2-201ENST00000621202 131 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 MIR4679-1-201ENST00000637619 75 ntBASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.31□□□□□ -1.4
CTC1Q2NKJ3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 CASC19-204ENST00000641001 2055 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 SNORD62.1-201ENST00000362541 86 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RNU6-984P-201ENST00000363236 109 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RNU6-179P-201ENST00000363350 107 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RNU6-215P-201ENST00000365169 102 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RNU6-842P-201ENST00000384269 107 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AL645927.1-201ENST00000396783 406 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC015977.1-201ENST00000418887 292 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AL035461.1-201ENST00000421490 332 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC093655.2-201ENST00000425735 631 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC091286.1-201ENST00000431233 461 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RPS26P40-201ENST00000435209 294 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 CYCSP51-201ENST00000443545 318 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RNU7-169P-201ENST00000459456 61 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC079804.1-201ENST00000461922 436 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 RNU6-488P-201ENST00000515918 99 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 SNORA31.6-201ENST00000516241 130 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 OR10G5P-201ENST00000532733 358 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 IGBP1P1-201ENST00000554337 1009 ntBASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.3□□□□□ -1.4
CTC1Q2NKJ3 AC103710.2-201ENST00000609912 942 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms