Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDK3Q00526 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
CDK3Q00526 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CDK3Q00526 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
CDK3Q00526 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.72□□□□□ -1.81
CDK3Q00526 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.72□□□□□ -1.81
CDK3Q00526 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK3Q00526 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK3Q00526 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDK3Q00526 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.72□□□□□ -1.81
CDK3Q00526 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK3Q00526 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDK3Q00526 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDK3Q00526 RNU6-253P-201ENST00000384730 105 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RNU6-821P-201ENST00000390995 107 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RN7SKP177-201ENST00000410567 355 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AC107081.1-201ENST00000414975 361 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RPL7P30-201ENST00000420888 709 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK3Q00526 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK3Q00526 TXNL1P1-201ENST00000429528 554 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 USP9YP7-201ENST00000436723 430 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 MTND5P2-201ENST00000442927 1142 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 USP9YP32-201ENST00000452432 430 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AL645939.1-201ENST00000453429 797 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 MEMO1P3-201ENST00000459811 302 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 LINC00888-204ENST00000487386 421 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK3Q00526 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.72□□□□□ -1.81
CDK3Q00526 MTCYBP43-201ENST00000513621 740 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RNU6-27P-201ENST00000516146 107 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RNA5SP208-201ENST00000516156 78 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RNU1-95P-201ENST00000516357 160 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 RNU1-128P-201ENST00000516704 160 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK3Q00526 AC239860.2-201ENST00000525886 270 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
CDK3Q00526 OR4P1P-201ENST00000530808 1136 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.72□□□□□ -1.81
CDK3Q00526 AC002400.1-201ENST00000569310 726 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 MIR5186-201ENST00000577504 120 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK3Q00526 MIR4429-201ENST00000580105 73 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDK3Q00526 AL596327.1-201ENST00000603629 213 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AL139286.1-201ENST00000604465 483 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AL133507.1-201ENST00000605269 557 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AC079684.1-201ENST00000621405 437 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 MIR4727-201ENST00000622232 55 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AC004009.2-201ENST00000623016 728 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 AC097655.1-201ENST00000635075 318 ntBASIC3.72□□□□□ -1.81
CDK3Q00526 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK3Q00526 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.72□□□□□ -1.81
CDK3Q00526 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDK3Q00526 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.72□□□□□ -1.81
CDK3Q00526 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CDK3Q00526 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDK3Q00526 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDK3Q00526 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDK3Q00526 AL356473.1-201ENST00000406203 1408 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AL022578.1-201ENST00000439330 1433 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK3Q00526 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.71□□□□□ -1.82
CDK3Q00526 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK3Q00526 AL391994.1-201ENST00000254724 282 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 OR5H2-201ENST00000355273 945 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK3Q00526 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 SOD2P1-201ENST00000396543 562 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 RPL21P17-201ENST00000397467 475 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AL031679.1-201ENST00000400616 525 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK3Q00526 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK3Q00526 AC019178.2-201ENST00000423595 505 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AC006548.1-201ENST00000427470 102 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK3Q00526 RPS6P15-201ENST00000431996 751 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 GOT2P5-201ENST00000433995 546 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AL591503.2-201ENST00000442314 1005 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 HSPE1P28-201ENST00000443139 211 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 MTCYBP3-201ENST00000445588 1137 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AL606662.1-201ENST00000445763 553 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 EEF1E1P1-201ENST00000446998 430 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 ARPC3P5-201ENST00000448802 534 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.71□□□□□ -1.82
CDK3Q00526 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK3Q00526 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK3Q00526 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CDK3Q00526 AP000926.1-201ENST00000479573 241 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 RPS3AP22-201ENST00000488297 769 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
CDK3Q00526 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK3Q00526 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK3Q00526 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.71□□□□□ -1.82
CDK3Q00526 HMGN1P11-201ENST00000508668 303 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CDK3Q00526 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CDK3Q00526 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK3Q00526 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms