Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC090330.1-201ENST00000588646 764 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AP003973.1-201ENST00000604639 691 ntBASIC3.32□□□□□ -1.88
CBX1P83916 RPL21P136-201ENST00000605378 396 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AC124312.4-201ENST00000605533 310 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AP005137.2-201ENST00000609238 400 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AC018755.4-201ENST00000619715 454 ntBASIC3.32□□□□□ -1.88
CBX1P83916 SNORD39.4-201ENST00000620099 78 ntBASIC3.32□□□□□ -1.88
CBX1P83916 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.32□□□□□ -1.88
CBX1P83916 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.32□□□□□ -1.88
CBX1P83916 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.32□□□□□ -1.88
CBX1P83916 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.32□□□□□ -1.88
CBX1P83916 AC010733.2-201ENST00000589496 5702 ntBASIC3.31□□□□□ -1.88
CBX1P83916 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CBX1P83916 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CBX1P83916 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.31□□□□□ -1.88
CBX1P83916 NUP58P1-201ENST00000502546 1738 ntBASIC3.31□□□□□ -1.88
CBX1P83916 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.31□□□□□ -1.88
CBX1P83916 AL645568.2-201ENST00000432815 1337 ntBASIC3.31□□□□□ -1.88
CBX1P83916 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 SPRR2C-201ENST00000290702 219 ntBASIC3.31□□□□□ -1.88
CBX1P83916 SNORA63.3-201ENST00000362682 132 ntBASIC3.31□□□□□ -1.88
CBX1P83916 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CBX1P83916 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CBX1P83916 SNORA3.3-201ENST00000408712 125 ntBASIC3.31□□□□□ -1.88
CBX1P83916 RNU6-712P-201ENST00000410558 100 ntBASIC3.31□□□□□ -1.88
CBX1P83916 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 AL356095.1-201ENST00000417217 199 ntBASIC3.31□□□□□ -1.88
CBX1P83916 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CBX1P83916 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.31□□□□□ -1.88
CBX1P83916 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 RPL36AP6-201ENST00000435770 321 ntBASIC3.31□□□□□ -1.88
CBX1P83916 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 ARPC3P2-201ENST00000457786 533 ntBASIC3.31□□□□□ -1.88
CBX1P83916 RPS27AP1-201ENST00000475545 471 ntBASIC3.31□□□□□ -1.88
CBX1P83916 RN7SL132P-201ENST00000478131 296 ntBASIC3.31□□□□□ -1.88
CBX1P83916 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 MTCO3P27-201ENST00000514397 196 ntBASIC3.31□□□□□ -1.88
CBX1P83916 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 AC023632.1-201ENST00000518463 375 ntBASIC3.31□□□□□ -1.88
CBX1P83916 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 AP001317.1-201ENST00000531194 960 ntBASIC3.31□□□□□ -1.88
CBX1P83916 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CBX1P83916 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 AC126177.3-201ENST00000551839 688 ntBASIC3.31□□□□□ -1.88
CBX1P83916 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX1P83916 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.31□□□□□ -1.88
CBX1P83916 AC015917.1-201ENST00000579654 510 ntBASIC3.31□□□□□ -1.88
CBX1P83916 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.31□□□□□ -1.88
CBX1P83916 RNU1-30P-201ENST00000606575 163 ntBASIC3.31□□□□□ -1.88
CBX1P83916 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
CBX1P83916 MIR6867-201ENST00000610636 67 ntBASIC3.31□□□□□ -1.88
CBX1P83916 AC026634.1-201ENST00000634369 198 ntBASIC3.31□□□□□ -1.88
CBX1P83916 ZNF663P-202ENST00000641770 1131 ntBASIC3.31□□□□□ -1.88
CBX1P83916 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CBX1P83916 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.3□□□□□ -1.88
CBX1P83916 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX1P83916 AC103988.1-201ENST00000566382 2177 ntBASIC3.3□□□□□ -1.88
CBX1P83916 SNORA51.6-201ENST00000384151 125 ntBASIC3.3□□□□□ -1.88
CBX1P83916 MCTS2P-201ENST00000394552 546 ntBASIC3.3□□□□□ -1.88
CBX1P83916 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CBX1P83916 AC027644.1-201ENST00000419595 298 ntBASIC3.3□□□□□ -1.88
CBX1P83916 MTCO1P48-201ENST00000448024 1096 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
CBX1P83916 SSXP4-201ENST00000451349 245 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.3□□□□□ -1.88
CBX1P83916 RPL7P19-201ENST00000469948 618 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.3□□□□□ -1.88
CBX1P83916 RPL7P23-201ENST00000493874 747 ntBASIC3.3□□□□□ -1.88
CBX1P83916 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CBX1P83916 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CBX1P83916 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX1P83916 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX1P83916 RNU1-61P-201ENST00000516107 151 ntBASIC3.3□□□□□ -1.88
CBX1P83916 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
CBX1P83916 snoZ278.1-201ENST00000517059 112 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC107982.3-201ENST00000584957 985 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CBX1P83916 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
CBX1P83916 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX1P83916 AC008083.4-201ENST00000615076 444 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC018926.1-201ENST00000616335 435 ntBASIC3.3□□□□□ -1.88
CBX1P83916 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.3□□□□□ -1.88
CBX1P83916 AC006927.2-201ENST00000639256 389 ntBASIC3.3□□□□□ -1.88
CBX1P83916 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CBX1P83916 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.29□□□□□ -1.88
CBX1P83916 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CBX1P83916 HMGB1P5-201ENST00000255320 642 ntBASIC3.29□□□□□ -1.88
CBX1P83916 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.29□□□□□ -1.88
CBX1P83916 MIR217-201ENST00000384817 110 ntBASIC3.29□□□□□ -1.88
CBX1P83916 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CBX1P83916 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.29□□□□□ -1.88
CBX1P83916 BOLA3P4-201ENST00000418151 400 ntBASIC3.29□□□□□ -1.88
CBX1P83916 AC092634.6-201ENST00000418558 192 ntBASIC3.29□□□□□ -1.88
CBX1P83916 KRR1P1-201ENST00000419430 803 ntBASIC3.29□□□□□ -1.88
CBX1P83916 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.29□□□□□ -1.88
CBX1P83916 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms