Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC234778.2-201ENST00000566241 354 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AC022069.1-201ENST00000582910 658 ntBASIC1.47□□□□□ -2.17
RPL39P62891 MIR4448-201ENST00000584360 86 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AC023813.4-201ENST00000607580 580 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RPL39P62891 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL39P62891 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL39P62891 AC004925.1-201ENST00000624256 2706 ntBASIC1.47□□□□□ -2.17
RPL39P62891 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL39P62891 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPL39P62891 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPL39P62891 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPL39P62891 ANKRD36P1-201ENST00000344424 659 ntBASIC1.46□□□□□ -2.18
RPL39P62891 RNU6-729P-201ENST00000384399 107 ntBASIC1.46□□□□□ -2.18
RPL39P62891 SNORA48.7-201ENST00000391302 135 ntBASIC1.46□□□□□ -2.18
RPL39P62891 RN7SKP27-201ENST00000410684 333 ntBASIC1.46□□□□□ -2.18
RPL39P62891 RNA5SP184-201ENST00000411071 108 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC009963.1-201ENST00000417265 157 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.46□□□□□ -2.18
RPL39P62891 AC008280.1-201ENST00000418851 412 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.46□□□□□ -2.18
RPL39P62891 NUP35P1-201ENST00000422734 947 ntBASIC1.46□□□□□ -2.18
RPL39P62891 PTP4A1P7-201ENST00000423476 514 ntBASIC1.46□□□□□ -2.18
RPL39P62891 HMGN2P38-201ENST00000423806 265 ntBASIC1.46□□□□□ -2.18
RPL39P62891 RPL7P44-201ENST00000424827 742 ntBASIC1.46□□□□□ -2.18
RPL39P62891 MTND6P6-201ENST00000478031 263 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC090096.1-201ENST00000489168 390 ntBASIC1.46□□□□□ -2.18
RPL39P62891 RPL23AP49-201ENST00000492925 468 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL39P62891 AC016550.3-201ENST00000515706 767 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC125611.2-201ENST00000551907 647 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL39P62891 MIR3935-201ENST00000583472 104 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AL033523.1-201ENST00000605153 153 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC112503.2-201ENST00000609005 552 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AL450472.3-201ENST00000615578 367 ntBASIC1.46□□□□□ -2.18
RPL39P62891 AC121761.2-201ENST00000617300 689 ntBASIC1.46□□□□□ -2.18
RPL39P62891 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.46□□□□□ -2.18
RPL39P62891 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.46□□□□□ -2.18
RPL39P62891 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RPL39P62891 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPL39P62891 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.46□□□□□ -2.18
RPL39P62891 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL39P62891 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL39P62891 NAMPTP1-201ENST00000440465 2514 ntBASIC1.45□□□□□ -2.18
RPL39P62891 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPL39P62891 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPL39P62891 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.45□□□□□ -2.18
RPL39P62891 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.45□□□□□ -2.18
RPL39P62891 SNORD46.1-201ENST00000364139 104 ntBASIC1.45□□□□□ -2.18
RPL39P62891 RNU6-7-201ENST00000364784 107 ntBASIC1.45□□□□□ -2.18
RPL39P62891 RNU6-8-201ENST00000365467 107 ntBASIC1.45□□□□□ -2.18
RPL39P62891 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.45□□□□□ -2.18
RPL39P62891 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RPL39P62891 SNORA48.2-201ENST00000390926 124 ntBASIC1.45□□□□□ -2.18
RPL39P62891 RPS4XP7-201ENST00000406274 780 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC073264.1-201ENST00000411508 416 ntBASIC1.45□□□□□ -2.18
RPL39P62891 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC099336.2-201ENST00000422457 254 ntBASIC1.45□□□□□ -2.18
RPL39P62891 RPS6P14-201ENST00000425165 719 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.45□□□□□ -2.18
RPL39P62891 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.45□□□□□ -2.18
RPL39P62891 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.45□□□□□ -2.18
RPL39P62891 AC090515.1-201ENST00000465295 476 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC097462.2-201ENST00000504623 481 ntBASIC1.45□□□□□ -2.18
RPL39P62891 RNU4-29P-201ENST00000515943 174 ntBASIC1.45□□□□□ -2.18
RPL39P62891 SNORD116-26-201ENST00000516006 96 ntBASIC1.45□□□□□ -2.18
RPL39P62891 SCARNA16.3-201ENST00000516595 184 ntBASIC1.45□□□□□ -2.18
RPL39P62891 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.45□□□□□ -2.18
RPL39P62891 GTF2IP8-201ENST00000560687 584 ntBASIC1.45□□□□□ -2.18
RPL39P62891 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.45□□□□□ -2.18
RPL39P62891 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.45□□□□□ -2.18
RPL39P62891 APOOP1-201ENST00000604695 592 ntBASIC1.45□□□□□ -2.18
RPL39P62891 MIR7106-201ENST00000612419 65 ntBASIC1.45□□□□□ -2.18
RPL39P62891 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.45□□□□□ -2.18
RPL39P62891 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
RPL39P62891 AC006386.2-201ENST00000624491 75 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC012005.1-201ENST00000624575 75 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC092184.1-201ENST00000625042 715 ntBASIC1.45□□□□□ -2.18
RPL39P62891 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.45□□□□□ -2.18
RPL39P62891 AL157700.1-201ENST00000561973 1432 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC093536.2-201ENST00000565257 1406 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AL365361.1-201ENST00000566942 3481 ntBASIC1.45□□□□□ -2.18
RPL39P62891 AC114546.3-201ENST00000623582 1734 ntBASIC1.45□□□□□ -2.18
RPL39P62891 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.45□□□□□ -2.18
RPL39P62891 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPL39P62891 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
RPL39P62891 OR4G1P-202ENST00000641173 1788 ntBASIC1.44□□□□□ -2.18
RPL39P62891 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
RPL39P62891 FTLP6-201ENST00000355274 422 ntBASIC1.44□□□□□ -2.18
RPL39P62891 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.44□□□□□ -2.18
RPL39P62891 AC114973.1-201ENST00000429057 632 ntBASIC1.44□□□□□ -2.18
RPL39P62891 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL39P62891 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL39P62891 Z99127.2-201ENST00000441426 334 ntBASIC1.44□□□□□ -2.18
RPL39P62891 MTCYBP14-201ENST00000457471 715 ntBASIC1.44□□□□□ -2.18
RPL39P62891 SEM1P1-201ENST00000506694 209 ntBASIC1.44□□□□□ -2.18
RPL39P62891 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.44□□□□□ -2.18
RPL39P62891 AC010625.1-201ENST00000511296 403 ntBASIC1.44□□□□□ -2.18
RPL39P62891 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms