Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HERVK_113P62684 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HERVK_113P62684 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.12□□□□□ -1.59
HERVK_113P62684 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 AC010329.2-201ENST00000595195 2737 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC006971.1-201ENST00000407916 4486 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 AC008079.2-201ENST00000623543 20396 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.12□□□□□ -1.59
HERVK_113P62684 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.12□□□□□ -1.59
HERVK_113P62684 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.12□□□□□ -1.59
HERVK_113P62684 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 RPL23AP57-201ENST00000332361 466 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 U8.3-201ENST00000363321 132 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 RNY4P14-201ENST00000363656 96 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 Y_RNA.409-201ENST00000383990 98 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 MIR3065-201ENST00000390137 79 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AL023807.1-201ENST00000407932 359 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 MTCO1P17-201ENST00000411522 491 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 TPMTP2-201ENST00000414372 726 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 MTATP6P27-201ENST00000416987 621 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.12□□□□□ -1.59
HERVK_113P62684 AL132765.1-201ENST00000434165 553 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 MTCO3P18-201ENST00000440206 761 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.12□□□□□ -1.59
HERVK_113P62684 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.12□□□□□ -1.59
HERVK_113P62684 RPS27AP17-201ENST00000463344 455 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC019235.1-201ENST00000503847 207 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC020593.1-201ENST00000507399 299 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 SAP18P1-201ENST00000512058 390 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HERVK_113P62684 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.12□□□□□ -1.59
HERVK_113P62684 ZNF705CP-201ENST00000530515 889 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AK6P1-201ENST00000540219 478 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 BPIFA4P-203ENST00000603168 689 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC123786.2-201ENST00000603459 275 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC079587.1-201ENST00000603846 277 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 AC017083.3-201ENST00000609955 700 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.12□□□□□ -1.59
HERVK_113P62684 MIR8059-201ENST00000620427 81 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 DUXAP9-208ENST00000622815 614 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 AC008785.1-201ENST00000624475 456 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 LRRC77P-213ENST00000637727 880 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERVK_113P62684 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HERVK_113P62684 IQCB2P-201ENST00000401788 1633 ntBASIC5.12□□□□□ -1.59
HERVK_113P62684 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.12□□□□□ -1.59
HERVK_113P62684 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.11□□□□□ -1.59
HERVK_113P62684 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HERVK_113P62684 RNU1-20P-201ENST00000363314 162 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 Y_RNA.573-201ENST00000384763 105 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AC016769.3-201ENST00000396562 315 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AL031679.1-201ENST00000400616 525 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 PPIAP31-201ENST00000405422 495 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 RN7SKP285-201ENST00000410137 318 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AL133384.1-201ENST00000412744 351 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AC138393.2-201ENST00000414742 246 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 TIMM9P3-201ENST00000428659 274 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 RPEP2-201ENST00000432149 701 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 USP12PX-201ENST00000432383 1057 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.11□□□□□ -1.59
HERVK_113P62684 RSU1P2-202ENST00000437884 485 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.11□□□□□ -1.59
HERVK_113P62684 RPL17P49-201ENST00000443728 411 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 UBE2V1P7-201ENST00000446395 340 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.11□□□□□ -1.59
HERVK_113P62684 SNORA84-201ENST00000459229 133 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 RPL31P50-201ENST00000471002 296 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.11□□□□□ -1.59
HERVK_113P62684 KCTD9P5-201ENST00000504141 1170 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 HMGB1P29-201ENST00000505659 499 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 ARL4AP2-201ENST00000507378 601 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AC008958.1-201ENST00000511047 682 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.11□□□□□ -1.59
HERVK_113P62684 RNU6-507P-201ENST00000516045 100 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 Y_RNA.704-201ENST00000516851 102 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HERVK_113P62684 AP003122.4-201ENST00000530980 758 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms