Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC084036.1-201ENST00000609190 508 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AL359198.2-201ENST00000611836 194 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC095031.1-201ENST00000623685 672 ntBASIC2.62□□□□□ -1.99
LSM6P62312 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM6P62312 AC138915.1-201ENST00000565427 1685 ntBASIC2.62□□□□□ -1.99
LSM6P62312 CUL1P1-201ENST00000509510 2425 ntBASIC2.62□□□□□ -1.99
LSM6P62312 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM6P62312 AC099654.7-201ENST00000635788 2127 ntBASIC2.62□□□□□ -1.99
LSM6P62312 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 FAM35BP-202ENST00000497389 3337 ntBASIC2.62□□□□□ -1.99
LSM6P62312 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LSM6P62312 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM6P62312 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM6P62312 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
LSM6P62312 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.61□□□□□ -1.99
LSM6P62312 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 AL353692.2-201ENST00000407054 335 ntBASIC2.61□□□□□ -1.99
LSM6P62312 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 SSXP9-201ENST00000417503 292 ntBASIC2.61□□□□□ -1.99
LSM6P62312 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM6P62312 UBE2D3P2-201ENST00000424409 445 ntBASIC2.61□□□□□ -1.99
LSM6P62312 RSL24D1P2-201ENST00000445584 366 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM6P62312 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 RPS29P2-201ENST00000479278 136 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC006445.1-201ENST00000491925 405 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC009901.1-201ENST00000506703 541 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC108157.1-201ENST00000510511 539 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC008885.1-201ENST00000514930 301 ntBASIC2.61□□□□□ -1.99
LSM6P62312 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM6P62312 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM6P62312 AC091057.2-201ENST00000602594 792 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC092474.3-201ENST00000603022 568 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC019159.1-201ENST00000605094 187 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC135178.6-201ENST00000605314 398 ntBASIC2.61□□□□□ -1.99
LSM6P62312 RPL23AP88-201ENST00000605759 454 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC069200.1-201ENST00000609511 323 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AL138880.2-201ENST00000616214 239 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC244100.1-202ENST00000621554 382 ntBASIC2.61□□□□□ -1.99
LSM6P62312 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM6P62312 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM6P62312 AC123912.3-201ENST00000600907 1367 ntBASIC2.61□□□□□ -1.99
LSM6P62312 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LSM6P62312 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LSM6P62312 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LSM6P62312 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LSM6P62312 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM6P62312 SNORD56.5-201ENST00000364281 72 ntBASIC2.6□□□□□ -1.99
LSM6P62312 RNU6-851P-201ENST00000384565 107 ntBASIC2.6□□□□□ -1.99
LSM6P62312 RNA5SP171-201ENST00000391071 115 ntBASIC2.6□□□□□ -1.99
LSM6P62312 SSXP10-201ENST00000402595 565 ntBASIC2.6□□□□□ -1.99
LSM6P62312 FAT1P1-201ENST00000406588 507 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AC010385.1-201ENST00000412374 256 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AL389915.1-201ENST00000422463 466 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM6P62312 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM6P62312 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM6P62312 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM6P62312 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LSM6P62312 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM6P62312 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.6□□□□□ -1.99
LSM6P62312 AP002404.1-201ENST00000532005 451 ntBASIC2.6□□□□□ -1.99
LSM6P62312 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM6P62312 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM6P62312 AC053481.3-201ENST00000577881 843 ntBASIC2.6□□□□□ -1.99
LSM6P62312 MIR3944-201ENST00000581277 108 ntBASIC2.6□□□□□ -1.99
LSM6P62312 SRGNP1-201ENST00000603392 451 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AC009570.1-201ENST00000609599 745 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AL360181.4-201ENST00000621752 134 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AC010338.1-201ENST00000621823 717 ntBASIC2.6□□□□□ -1.99
LSM6P62312 AC002064.3-201ENST00000623448 346 ntBASIC2.6□□□□□ -1.99
LSM6P62312 SGO1P2-201ENST00000429458 1589 ntBASIC2.6□□□□□ -1.99
LSM6P62312 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM6P62312 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM6P62312 AL355596.1-201ENST00000565399 3996 ntBASIC2.59□□□□□ -1.99
LSM6P62312 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM6P62312 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM6P62312 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LSM6P62312 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM6P62312 SNORA9.2-201ENST00000365361 133 ntBASIC2.59□□□□□ -1.99
LSM6P62312 Y_RNA.493-201ENST00000384422 102 ntBASIC2.59□□□□□ -1.99
LSM6P62312 U3.42-201ENST00000408746 214 ntBASIC2.59□□□□□ -1.99
LSM6P62312 RNU4-78P-201ENST00000410940 126 ntBASIC2.59□□□□□ -1.99
LSM6P62312 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM6P62312 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM6P62312 RPS6P14-201ENST00000425165 719 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM6P62312 PTP4A1P3-201ENST00000433661 420 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM6P62312 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM6P62312 RPL23AP15-201ENST00000450202 459 ntBASIC2.59□□□□□ -1.99
LSM6P62312 OR6K1P-201ENST00000456766 971 ntBASIC2.59□□□□□ -1.99
LSM6P62312 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms