Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.45□□□□□ -2.02
CMC4P56277 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.45□□□□□ -2.02
CMC4P56277 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.45□□□□□ -2.02
CMC4P56277 AP001542.2-201ENST00000593141 364 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AC011492.1-201ENST00000600023 315 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AL162713.1-201ENST00000604480 262 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AP003973.1-201ENST00000604639 691 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AL034351.1-201ENST00000605288 668 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AL159169.3-201ENST00000608871 561 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CMC4P56277 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.45□□□□□ -2.02
CMC4P56277 AC244100.1-202ENST00000621554 382 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AC109454.4-201ENST00000623411 649 ntBASIC2.45□□□□□ -2.02
CMC4P56277 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.45□□□□□ -2.02
CMC4P56277 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.45□□□□□ -2.02
CMC4P56277 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.45□□□□□ -2.02
CMC4P56277 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CMC4P56277 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CMC4P56277 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CMC4P56277 Z82195.2-201ENST00000612348 18351 ntBASIC2.45□□□□□ -2.02
CMC4P56277 AL136164.4-201ENST00000625013 2135 ntBASIC2.45□□□□□ -2.02
CMC4P56277 NUP58P1-201ENST00000502546 1738 ntBASIC2.45□□□□□ -2.02
CMC4P56277 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CMC4P56277 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.45□□□□□ -2.02
CMC4P56277 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.45□□□□□ -2.02
CMC4P56277 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CMC4P56277 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CMC4P56277 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 MFSD8-236ENST00000641509 4050 ntBASIC2.44□□□□□ -2.02
CMC4P56277 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.44□□□□□ -2.02
CMC4P56277 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 RNU6-1249P-201ENST00000363237 111 ntBASIC2.44□□□□□ -2.02
CMC4P56277 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 U3.29-201ENST00000391296 212 ntBASIC2.44□□□□□ -2.02
CMC4P56277 PTMAP5-201ENST00000393073 333 ntBASIC2.44□□□□□ -2.02
CMC4P56277 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 AC007390.1-201ENST00000415722 356 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC092634.6-201ENST00000418558 192 ntBASIC2.44□□□□□ -2.02
CMC4P56277 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AL389915.1-201ENST00000422463 466 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC013262.1-201ENST00000426710 252 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AL035410.1-201ENST00000427409 427 ntBASIC2.44□□□□□ -2.02
CMC4P56277 MTCYBP32-201ENST00000427945 1084 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 ATP5C1P1-201ENST00000441945 895 ntBASIC2.44□□□□□ -2.02
CMC4P56277 MTCO1P48-201ENST00000448024 1096 ntBASIC2.44□□□□□ -2.02
CMC4P56277 MRPL42P4-201ENST00000453267 443 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 AL445669.2-201ENST00000454425 421 ntBASIC2.44□□□□□ -2.02
CMC4P56277 CFTRP1-201ENST00000456646 183 ntBASIC2.44□□□□□ -2.02
CMC4P56277 HMGB1P25-201ENST00000468402 607 ntBASIC2.44□□□□□ -2.02
CMC4P56277 RPL21P13-201ENST00000488305 481 ntBASIC2.44□□□□□ -2.02
CMC4P56277 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.44□□□□□ -2.02
CMC4P56277 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 AC019227.1-201ENST00000526902 510 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AP001317.1-201ENST00000531194 960 ntBASIC2.44□□□□□ -2.02
CMC4P56277 MTND5P21-201ENST00000531961 522 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC018630.1-201ENST00000541376 925 ntBASIC2.44□□□□□ -2.02
CMC4P56277 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 AC007458.1-201ENST00000542812 373 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AL389895.1-201ENST00000554127 252 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 AC087481.2-201ENST00000565492 330 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.44□□□□□ -2.02
CMC4P56277 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 SRGNP1-201ENST00000603392 451 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC024220.1-201ENST00000603675 484 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AL158211.2-201ENST00000607282 395 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AP000238.1-201ENST00000608759 426 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC006329.2-201ENST00000611491 394 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC008083.4-201ENST00000615076 444 ntBASIC2.44□□□□□ -2.02
CMC4P56277 XIST_intron.1-201ENST00000619444 68 ntBASIC2.44□□□□□ -2.02
CMC4P56277 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.44□□□□□ -2.02
CMC4P56277 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 AC127502.3-201ENST00000636170 1206 ntBASIC2.44□□□□□ -2.02
CMC4P56277 MIR622-201ENST00000638396 96 ntBASIC2.44□□□□□ -2.02
CMC4P56277 AC111188.2-201ENST00000529697 1387 ntBASIC2.44□□□□□ -2.02
CMC4P56277 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 AL049780.3-201ENST00000624612 1583 ntBASIC2.44□□□□□ -2.02
CMC4P56277 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CMC4P56277 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CMC4P56277 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CMC4P56277 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.44□□□□□ -2.02
CMC4P56277 GDI2P1-201ENST00000429312 1336 ntBASIC2.43□□□□□ -2.02
CMC4P56277 AC009487.2-201ENST00000420969 6821 ntBASIC2.43□□□□□ -2.02
CMC4P56277 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CMC4P56277 HMGB1P5-201ENST00000255320 642 ntBASIC2.43□□□□□ -2.02
CMC4P56277 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CMC4P56277 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CMC4P56277 MIR30E-201ENST00000362104 92 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms