Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RABEPKP1-201ENST00000440529 1026 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 AL162388.1-201ENST00000450912 352 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 RPL18AP17-201ENST00000455326 198 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 AL445433.1-201ENST00000457507 257 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 RPL23AP24-201ENST00000458203 385 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXG1P55316 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 HMGB1P29-201ENST00000505659 499 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 OR51K1P-201ENST00000510214 950 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 Y_RNA.693-201ENST00000516641 110 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXG1P55316 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 AL359212.1-201ENST00000556608 614 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 AC090515.3-201ENST00000560431 315 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC107954.1-201ENST00000565906 727 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC141257.3-201ENST00000572906 215 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC010928.3-201ENST00000587712 541 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXG1P55316 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXG1P55316 BNIP3P10-201ENST00000605360 577 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC008966.2-201ENST00000606157 453 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 Z98200.1-201ENST00000607298 470 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AL365204.3-201ENST00000612448 685 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXG1P55316 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXG1P55316 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXG1P55316 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
FOXG1P55316 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXG1P55316 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXG1P55316 AL118496.1-201ENST00000440201 1812 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXG1P55316 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXG1P55316 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXG1P55316 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXG1P55316 AC125257.1-201ENST00000560400 2930 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 AC074029.4-201ENST00000624796 1859 ntBASIC3.9□□□□□ -1.79
FOXG1P55316 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXG1P55316 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXG1P55316 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
FOXG1P55316 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 MTCO1P14-201ENST00000441695 1559 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RNF6P1-201ENST00000444889 1784 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC090017.1-201ENST00000548612 1779 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC022031.1-201ENST00000585985 2593 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 Y_RNA.1-201ENST00000352915 104 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RPL32P3-201ENST00000359025 275 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 Y_RNA.58-201ENST00000362807 102 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RNU6-582P-201ENST00000362989 107 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RNU6-1085P-201ENST00000363576 107 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 Y_RNA.154-201ENST00000363624 102 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RNY3P1-201ENST00000365085 102 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RNY3-201ENST00000365484 102 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
FOXG1P55316 Y_RNA.490-201ENST00000384413 102 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC099336.2-201ENST00000422457 254 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RPS12P5-201ENST00000423449 371 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RPL12P34-201ENST00000424532 479 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 BX890604.2-201ENST00000427883 474 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC092013.1-201ENST00000438795 332 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 UBE2V1P5-201ENST00000440070 405 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 RPL7P59-201ENST00000447700 943 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC099560.2-201ENST00000457554 255 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.89□□□□□ -1.79
FOXG1P55316 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 MTND5P4-201ENST00000514978 288 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 SLC2A13P1-201ENST00000531560 322 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 HIF1AP1-201ENST00000553642 175 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXG1P55316 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms