Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC115286.1-201ENST00000604298 434 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 DUXAP9-208ENST00000622815 614 ntBASIC5.18□□□□□ -1.58
MRE11P49959 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 AL592437.2-201ENST00000421655 2434 ntBASIC5.17□□□□□ -1.58
MRE11P49959 MTCO1P14-201ENST00000441695 1559 ntBASIC5.17□□□□□ -1.58
MRE11P49959 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 LINC00561-201ENST00000565815 2738 ntBASIC5.17□□□□□ -1.58
MRE11P49959 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 Y_RNA.70-201ENST00000362886 110 ntBASIC5.17□□□□□ -1.58
MRE11P49959 SNORA72.1-201ENST00000363485 129 ntBASIC5.17□□□□□ -1.58
MRE11P49959 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 RN7SKP202-201ENST00000410439 330 ntBASIC5.17□□□□□ -1.58
MRE11P49959 RNU2-6P-201ENST00000411404 190 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.17□□□□□ -1.58
MRE11P49959 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.17□□□□□ -1.58
MRE11P49959 AC233728.2-201ENST00000425348 757 ntBASIC5.17□□□□□ -1.58
MRE11P49959 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC007742.1-201ENST00000425789 329 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AL356583.2-201ENST00000426536 280 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 ELOCP26-201ENST00000436067 329 ntBASIC5.17□□□□□ -1.58
MRE11P49959 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC092427.1-201ENST00000439177 601 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.17□□□□□ -1.58
MRE11P49959 NFU1P2-201ENST00000448700 469 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 PSPHP1-201ENST00000450062 261 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC013267.1-201ENST00000458227 267 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC091564.1-201ENST00000464563 479 ntBASIC5.17□□□□□ -1.58
MRE11P49959 RN7SL542P-201ENST00000467147 294 ntBASIC5.17□□□□□ -1.58
MRE11P49959 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
MRE11P49959 AC017037.1-201ENST00000508460 471 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC098799.2-201ENST00000509466 868 ntBASIC5.17□□□□□ -1.58
MRE11P49959 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 RNU6-583P-201ENST00000516012 92 ntBASIC5.17□□□□□ -1.58
MRE11P49959 RNA5SP216-201ENST00000516111 123 ntBASIC5.17□□□□□ -1.58
MRE11P49959 RN7SKP283-201ENST00000517197 270 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.17□□□□□ -1.58
MRE11P49959 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.17□□□□□ -1.58
MRE11P49959 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.17□□□□□ -1.58
MRE11P49959 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.17□□□□□ -1.58
MRE11P49959 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.17□□□□□ -1.58
MRE11P49959 RN7SL802P-201ENST00000577858 299 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC006504.3-201ENST00000586818 523 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC020914.4-201ENST00000597690 277 ntBASIC5.17□□□□□ -1.58
MRE11P49959 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 AC091488.1-201ENST00000604239 660 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC104458.1-201ENST00000608243 463 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC092954.2-201ENST00000609103 430 ntBASIC5.17□□□□□ -1.58
MRE11P49959 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 AL359535.1-201ENST00000612100 1087 ntBASIC5.17□□□□□ -1.58
MRE11P49959 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 AC006338.1-201ENST00000618453 749 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AL158209.2-201ENST00000619266 216 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AL139089.1-201ENST00000620372 975 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MRE11P49959 AL023881.1-201ENST00000621088 301 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC124864.2-201ENST00000624736 186 ntBASIC5.17□□□□□ -1.58
MRE11P49959 BMS1P21-201ENST00000634565 365 ntBASIC5.17□□□□□ -1.58
MRE11P49959 AC027287.1-201ENST00000553115 1453 ntBASIC5.17□□□□□ -1.58
MRE11P49959 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
MRE11P49959 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.17□□□□□ -1.58
MRE11P49959 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
MRE11P49959 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MRE11P49959 NXPH1-205ENST00000602349 1953 ntBASIC5.16□□□□□ -1.58
MRE11P49959 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.16□□□□□ -1.58
MRE11P49959 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MRE11P49959 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.16□□□□□ -1.58
MRE11P49959 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.16□□□□□ -1.58
MRE11P49959 AP002001.2-201ENST00000529025 1469 ntBASIC5.16□□□□□ -1.58
MRE11P49959 RNU6-317P-201ENST00000384031 107 ntBASIC5.16□□□□□ -1.58
MRE11P49959 Y_RNA.450-201ENST00000384198 113 ntBASIC5.16□□□□□ -1.58
MRE11P49959 MIR129-1-201ENST00000384972 72 ntBASIC5.16□□□□□ -1.58
MRE11P49959 Z97832.1-201ENST00000402490 328 ntBASIC5.16□□□□□ -1.58
MRE11P49959 FGF7P8-201ENST00000402994 292 ntBASIC5.16□□□□□ -1.58
MRE11P49959 RN7SKP106-201ENST00000410832 272 ntBASIC5.16□□□□□ -1.58
MRE11P49959 RNU6-272P-201ENST00000411028 104 ntBASIC5.16□□□□□ -1.58
MRE11P49959 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.16□□□□□ -1.58
MRE11P49959 MTCYBP24-201ENST00000420387 1106 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms