Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.76□□□□□ -1.81
LHX1P48742 SKP1P1-201ENST00000438081 489 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.76□□□□□ -1.81
LHX1P48742 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 RPL39P6-201ENST00000448289 150 ntBASIC3.76□□□□□ -1.81
LHX1P48742 CYCSP35-201ENST00000451978 304 ntBASIC3.76□□□□□ -1.81
LHX1P48742 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 U3.44-201ENST00000458938 192 ntBASIC3.76□□□□□ -1.81
LHX1P48742 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.76□□□□□ -1.81
LHX1P48742 AC034236.1-201ENST00000469891 373 ntBASIC3.76□□□□□ -1.81
LHX1P48742 RN7SL594P-201ENST00000470590 287 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.76□□□□□ -1.81
LHX1P48742 AC108078.3-201ENST00000502633 489 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC034244.1-201ENST00000507687 207 ntBASIC3.76□□□□□ -1.81
LHX1P48742 MIR2114-201ENST00000516645 80 ntBASIC3.76□□□□□ -1.81
LHX1P48742 RN7SKP116-201ENST00000516902 319 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.76□□□□□ -1.81
LHX1P48742 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.76□□□□□ -1.81
LHX1P48742 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.76□□□□□ -1.81
LHX1P48742 AC009097.3-201ENST00000563557 1018 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC009712.1-201ENST00000564938 316 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC107954.1-201ENST00000565906 727 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC009101.1-201ENST00000568135 242 ntBASIC3.76□□□□□ -1.81
LHX1P48742 LARP7P2-201ENST00000575306 125 ntBASIC3.76□□□□□ -1.81
LHX1P48742 MIR3944-201ENST00000581277 108 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC024220.1-201ENST00000603675 484 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 AC069304.2-201ENST00000605154 435 ntBASIC3.76□□□□□ -1.81
LHX1P48742 HMGB1P50-201ENST00000605814 607 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC073968.1-201ENST00000618594 637 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC244100.1-202ENST00000621554 382 ntBASIC3.76□□□□□ -1.81
LHX1P48742 U4.6-201ENST00000621618 127 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AP000770.2-201ENST00000623694 100 ntBASIC3.76□□□□□ -1.81
LHX1P48742 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.76□□□□□ -1.81
LHX1P48742 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.75□□□□□ -1.81
LHX1P48742 AC006504.1-201ENST00000562493 3666 ntBASIC3.75□□□□□ -1.81
LHX1P48742 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
LHX1P48742 AP000776.1-201ENST00000530032 1663 ntBASIC3.75□□□□□ -1.81
LHX1P48742 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 AC005539.1-201ENST00000443768 1479 ntBASIC3.75□□□□□ -1.81
LHX1P48742 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 FAM133CP-201ENST00000332869 704 ntBASIC3.75□□□□□ -1.81
LHX1P48742 RNU1-18P-201ENST00000363062 164 ntBASIC3.75□□□□□ -1.81
LHX1P48742 RNA5SP50-201ENST00000363731 107 ntBASIC3.75□□□□□ -1.81
LHX1P48742 RNU6-621P-201ENST00000364752 109 ntBASIC3.75□□□□□ -1.81
LHX1P48742 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.75□□□□□ -1.81
LHX1P48742 RNU6-730P-201ENST00000383954 104 ntBASIC3.75□□□□□ -1.81
LHX1P48742 MIR183-201ENST00000384958 110 ntBASIC3.75□□□□□ -1.81
LHX1P48742 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.75□□□□□ -1.81
LHX1P48742 MTND4LP20-201ENST00000402379 270 ntBASIC3.75□□□□□ -1.81
LHX1P48742 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.75□□□□□ -1.81
LHX1P48742 RNA5SP239-201ENST00000410218 129 ntBASIC3.75□□□□□ -1.81
LHX1P48742 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 AL008987.1-201ENST00000415528 237 ntBASIC3.75□□□□□ -1.81
LHX1P48742 TIMM9P2-201ENST00000419324 266 ntBASIC3.75□□□□□ -1.81
LHX1P48742 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 ATP5JP1-201ENST00000431631 322 ntBASIC3.75□□□□□ -1.81
LHX1P48742 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.75□□□□□ -1.81
LHX1P48742 MTCO2P20-201ENST00000437339 673 ntBASIC3.75□□□□□ -1.81
LHX1P48742 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 AC127537.2-201ENST00000439258 465 ntBASIC3.75□□□□□ -1.81
LHX1P48742 MTND3P1-201ENST00000441336 220 ntBASIC3.75□□□□□ -1.81
LHX1P48742 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 EXTL2P1-201ENST00000446218 416 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AL645939.1-201ENST00000453429 797 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AC010587.2-201ENST00000511727 448 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 AP003385.6-201ENST00000531603 374 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AC092851.1-201ENST00000535964 478 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.75□□□□□ -1.81
LHX1P48742 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.75□□□□□ -1.81
LHX1P48742 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.75□□□□□ -1.81
LHX1P48742 BNIP3P24-201ENST00000593398 557 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.75□□□□□ -1.81
LHX1P48742 AC124312.4-201ENST00000605533 310 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AC084757.4-201ENST00000616350 526 ntBASIC3.75□□□□□ -1.81
LHX1P48742 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.75□□□□□ -1.81
LHX1P48742 AC012314.7-201ENST00000619693 93 ntBASIC3.75□□□□□ -1.81
LHX1P48742 CYP3A51P-201ENST00000633513 256 ntBASIC3.75□□□□□ -1.81
LHX1P48742 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 U6.101-201ENST00000637707 76 ntBASIC3.75□□□□□ -1.81
LHX1P48742 MIR1322-201ENST00000638013 71 ntBASIC3.75□□□□□ -1.81
LHX1P48742 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 MTCO1P12-201ENST00000414273 1543 ntBASIC3.75□□□□□ -1.81
LHX1P48742 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LHX1P48742 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX1P48742 FRG1CP-201ENST00000358464 769 ntBASIC3.74□□□□□ -1.81
LHX1P48742 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX1P48742 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LHX1P48742 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms