Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
APCP25054 USP9YP6-201ENST00000413550 854 ntBASIC1.92□□□□□ -2.1
APCP25054 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.92□□□□□ -2.1
APCP25054 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.92□□□□□ -2.1
APCP25054 USP9YP34-201ENST00000453983 808 ntBASIC1.92□□□□□ -2.1
APCP25054 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.92□□□□□ -2.1
APCP25054 AC126177.3-201ENST00000551839 688 ntBASIC1.92□□□□□ -2.1
APCP25054 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.92□□□□□ -2.1
APCP25054 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.92□□□□□ -2.1
APCP25054 AC110741.2-201ENST00000605278 268 ntBASIC1.92□□□□□ -2.1
APCP25054 AL450489.1-201ENST00000612071 468 ntBASIC1.92□□□□□ -2.1
APCP25054 MIR1291-201ENST00000627649 87 ntBASIC1.92□□□□□ -2.1
APCP25054 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.92□□□□□ -2.1
APCP25054 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APCP25054 RNU1-100P-201ENST00000365255 165 ntBASIC1.91□□□□□ -2.1
APCP25054 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APCP25054 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.91□□□□□ -2.1
APCP25054 RPL7P54-201ENST00000438336 674 ntBASIC1.91□□□□□ -2.1
APCP25054 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.91□□□□□ -2.1
APCP25054 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.91□□□□□ -2.1
APCP25054 MIR6779-201ENST00000617283 64 ntBASIC1.91□□□□□ -2.1
APCP25054 YWHAEP7-203ENST00000622054 312 ntBASIC1.91□□□□□ -2.1
APCP25054 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.91□□□□□ -2.1
APCP25054 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APCP25054 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APCP25054 AL139276.1-201ENST00000311910 1001 ntBASIC1.91□□□□□ -2.1
APCP25054 RNU6-457P-201ENST00000363999 107 ntBASIC1.91□□□□□ -2.1
APCP25054 FGF7P8-201ENST00000402994 292 ntBASIC1.91□□□□□ -2.1
APCP25054 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
APCP25054 ALDH7A1P3-201ENST00000492517 345 ntBASIC1.91□□□□□ -2.1
APCP25054 DYNLL1P6-201ENST00000503440 264 ntBASIC1.91□□□□□ -2.1
APCP25054 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.91□□□□□ -2.1
APCP25054 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.91□□□□□ -2.1
APCP25054 AC022960.2-201ENST00000616300 666 ntBASIC1.91□□□□□ -2.1
APCP25054 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
APCP25054 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.91□□□□□ -2.1
APCP25054 Z99496.1-201ENST00000469424 1477 ntBASIC1.91□□□□□ -2.1
APCP25054 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
APCP25054 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APCP25054 SNORD114-26-201ENST00000363543 72 ntBASIC1.9□□□□□ -2.1
APCP25054 Y_RNA.374-201ENST00000365606 101 ntBASIC1.9□□□□□ -2.1
APCP25054 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
APCP25054 LUZP4P1-201ENST00000415420 344 ntBASIC1.9□□□□□ -2.1
APCP25054 AL450263.2-201ENST00000439400 589 ntBASIC1.9□□□□□ -2.1
APCP25054 AC011037.1-201ENST00000483964 558 ntBASIC1.9□□□□□ -2.1
APCP25054 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.9□□□□□ -2.1
APCP25054 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.9□□□□□ -2.1
APCP25054 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
APCP25054 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
APCP25054 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.9□□□□□ -2.1
APCP25054 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
APCP25054 AC090229.1-201ENST00000590983 1609 ntBASIC1.9□□□□□ -2.11
APCP25054 AL355379.1-201ENST00000405542 640 ntBASIC1.9□□□□□ -2.11
APCP25054 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.9□□□□□ -2.11
APCP25054 HMGB3P23-201ENST00000414981 585 ntBASIC1.9□□□□□ -2.11
APCP25054 MTATP6P11-201ENST00000428071 670 ntBASIC1.9□□□□□ -2.11
APCP25054 AL390023.1-201ENST00000428836 262 ntBASIC1.9□□□□□ -2.11
APCP25054 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.9□□□□□ -2.11
APCP25054 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
APCP25054 RPS15AP28-201ENST00000435088 386 ntBASIC1.9□□□□□ -2.11
APCP25054 AC105402.2-201ENST00000438503 358 ntBASIC1.9□□□□□ -2.11
APCP25054 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.9□□□□□ -2.11
APCP25054 AC026412.2-201ENST00000512270 1075 ntBASIC1.9□□□□□ -2.11
APCP25054 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.9□□□□□ -2.11
APCP25054 AC011611.5-201ENST00000552477 578 ntBASIC1.9□□□□□ -2.11
APCP25054 AC105137.2-201ENST00000569073 466 ntBASIC1.9□□□□□ -2.11
APCP25054 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.9□□□□□ -2.11
APCP25054 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.9□□□□□ -2.11
APCP25054 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.9□□□□□ -2.11
APCP25054 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.9□□□□□ -2.11
APCP25054 RNU6-707P-201ENST00000364647 95 ntBASIC1.9□□□□□ -2.11
APCP25054 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
APCP25054 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
APCP25054 MOB1AP2-201ENST00000446060 614 ntBASIC1.9□□□□□ -2.11
APCP25054 RPL12P25-201ENST00000455592 494 ntBASIC1.9□□□□□ -2.11
APCP25054 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.9□□□□□ -2.11
APCP25054 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.9□□□□□ -2.11
APCP25054 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
APCP25054 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.89□□□□□ -2.11
APCP25054 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
APCP25054 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
APCP25054 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
APCP25054 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.89□□□□□ -2.11
APCP25054 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
APCP25054 TXNP6-201ENST00000510190 310 ntBASIC1.89□□□□□ -2.11
APCP25054 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.89□□□□□ -2.11
APCP25054 SNORA4-201ENST00000584302 138 ntBASIC1.89□□□□□ -2.11
APCP25054 AC091046.2-201ENST00000620775 665 ntBASIC1.89□□□□□ -2.11
APCP25054 RNU6-392P-201ENST00000364926 101 ntBASIC1.89□□□□□ -2.11
APCP25054 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
APCP25054 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
APCP25054 RNU4-62P-201ENST00000410125 130 ntBASIC1.89□□□□□ -2.11
APCP25054 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.89□□□□□ -2.11
APCP25054 AC125238.1-201ENST00000448842 249 ntBASIC1.89□□□□□ -2.11
APCP25054 HMGB3P8-201ENST00000449709 577 ntBASIC1.89□□□□□ -2.11
APCP25054 AC105918.1-201ENST00000474399 838 ntBASIC1.89□□□□□ -2.11
APCP25054 AC072039.1-201ENST00000477611 581 ntBASIC1.89□□□□□ -2.11
APCP25054 AC126182.1-201ENST00000478134 357 ntBASIC1.89□□□□□ -2.11
APCP25054 MTCYBP20-201ENST00000524239 1129 ntBASIC1.89□□□□□ -2.11
APCP25054 OR4T1P-201ENST00000554933 911 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms