Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SNORA64.4-201ENST00000516632 81 ntBASIC2.36□□□□□ -2.03
VCANP13611 MIR4452-201ENST00000583004 71 ntBASIC2.36□□□□□ -2.03
VCANP13611 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.36□□□□□ -2.03
VCANP13611 RPAP2P1-201ENST00000603626 1168 ntBASIC2.36□□□□□ -2.03
VCANP13611 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
VCANP13611 OR11H5P-202ENST00000641612 1325 ntBASIC2.36□□□□□ -2.03
VCANP13611 AC005261.6-201ENST00000623072 1387 ntBASIC2.35□□□□□ -2.03
VCANP13611 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCANP13611 UBE2V1P5-201ENST00000440070 405 ntBASIC2.35□□□□□ -2.03
VCANP13611 AC104389.3-201ENST00000445629 235 ntBASIC2.35□□□□□ -2.03
VCANP13611 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
VCANP13611 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.35□□□□□ -2.03
VCANP13611 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.35□□□□□ -2.03
VCANP13611 Y_RNA.191-201ENST00000363972 113 ntBASIC2.35□□□□□ -2.03
VCANP13611 MIR625-201ENST00000385047 85 ntBASIC2.35□□□□□ -2.03
VCANP13611 USP9YP20-201ENST00000419224 558 ntBASIC2.35□□□□□ -2.03
VCANP13611 CCNHP1-201ENST00000513311 678 ntBASIC2.35□□□□□ -2.03
VCANP13611 RNA5SP220-201ENST00000516298 104 ntBASIC2.35□□□□□ -2.03
VCANP13611 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
VCANP13611 AC007342.7-201ENST00000624610 2337 ntBASIC2.35□□□□□ -2.03
VCANP13611 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VCANP13611 AL139156.1-201ENST00000412785 841 ntBASIC2.35□□□□□ -2.03
VCANP13611 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.35□□□□□ -2.03
VCANP13611 AL365396.1-201ENST00000430854 671 ntBASIC2.35□□□□□ -2.03
VCANP13611 OR4K11P-201ENST00000431829 904 ntBASIC2.35□□□□□ -2.03
VCANP13611 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
VCANP13611 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.35□□□□□ -2.03
VCANP13611 AC021269.2-201ENST00000532318 330 ntBASIC2.35□□□□□ -2.03
VCANP13611 AC005951.1-201ENST00000576706 485 ntBASIC2.35□□□□□ -2.03
VCANP13611 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.35□□□□□ -2.03
VCANP13611 AC010378.1-201ENST00000619270 362 ntBASIC2.35□□□□□ -2.03
VCANP13611 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCANP13611 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCANP13611 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
VCANP13611 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VCANP13611 AL034379.1-201ENST00000423216 253 ntBASIC2.34□□□□□ -2.03
VCANP13611 MTND6P18-201ENST00000439477 513 ntBASIC2.34□□□□□ -2.03
VCANP13611 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.34□□□□□ -2.03
VCANP13611 AP000857.1-201ENST00000532151 543 ntBASIC2.34□□□□□ -2.03
VCANP13611 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.34□□□□□ -2.03
VCANP13611 MIR6515-201ENST00000619843 57 ntBASIC2.34□□□□□ -2.03
VCANP13611 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
VCANP13611 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCANP13611 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.34□□□□□ -2.03
VCANP13611 AL583834.1-201ENST00000406943 343 ntBASIC2.34□□□□□ -2.04
VCANP13611 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.34□□□□□ -2.04
VCANP13611 AC104332.2-201ENST00000429959 156 ntBASIC2.34□□□□□ -2.04
VCANP13611 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.34□□□□□ -2.04
VCANP13611 AC233279.1-201ENST00000455300 423 ntBASIC2.34□□□□□ -2.04
VCANP13611 MLLT10P2-201ENST00000506434 249 ntBASIC2.34□□□□□ -2.04
VCANP13611 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.34□□□□□ -2.04
VCANP13611 AL591516.1-201ENST00000611326 274 ntBASIC2.34□□□□□ -2.04
VCANP13611 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.34□□□□□ -2.04
VCANP13611 AF127577.6-201ENST00000623352 2191 ntBASIC2.34□□□□□ -2.04
VCANP13611 AC090229.1-201ENST00000590983 1609 ntBASIC2.34□□□□□ -2.04
VCANP13611 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
VCANP13611 RNU1-57P-201ENST00000384491 166 ntBASIC2.33□□□□□ -2.04
VCANP13611 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.33□□□□□ -2.04
VCANP13611 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.33□□□□□ -2.04
VCANP13611 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.33□□□□□ -2.04
VCANP13611 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.33□□□□□ -2.04
VCANP13611 AC004825.2-201ENST00000616634 455 ntBASIC2.33□□□□□ -2.04
VCANP13611 AL359740.1-201ENST00000624340 592 ntBASIC2.33□□□□□ -2.04
VCANP13611 SPATA2P1-201ENST00000431223 2055 ntBASIC2.33□□□□□ -2.04
VCANP13611 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCANP13611 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VCANP13611 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.33□□□□□ -2.04
VCANP13611 RN7SKP285-201ENST00000410137 318 ntBASIC2.33□□□□□ -2.04
VCANP13611 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
VCANP13611 AC013410.1-201ENST00000436223 1232 ntBASIC2.33□□□□□ -2.04
VCANP13611 AC104090.1-201ENST00000506341 1171 ntBASIC2.33□□□□□ -2.04
VCANP13611 AC103710.1-201ENST00000610003 901 ntBASIC2.33□□□□□ -2.04
VCANP13611 OR1S1-201ENST00000624470 978 ntBASIC2.33□□□□□ -2.04
VCANP13611 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VCANP13611 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VCANP13611 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.33□□□□□ -2.04
VCANP13611 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VCANP13611 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
VCANP13611 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.33□□□□□ -2.04
VCANP13611 RPL23AP84-201ENST00000571193 464 ntBASIC2.33□□□□□ -2.04
VCANP13611 MIR3605-201ENST00000583214 100 ntBASIC2.33□□□□□ -2.04
VCANP13611 BX248123.2-201ENST00000606318 124 ntBASIC2.33□□□□□ -2.04
VCANP13611 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.33□□□□□ -2.04
VCANP13611 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VCANP13611 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
VCANP13611 CDC27P2-201ENST00000425026 1922 ntBASIC2.32□□□□□ -2.04
VCANP13611 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VCANP13611 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCANP13611 AC002543.1-201ENST00000299783 1954 ntBASIC2.32□□□□□ -2.04
VCANP13611 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
VCANP13611 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VCANP13611 AL137159.1-201ENST00000452808 512 ntBASIC2.32□□□□□ -2.04
VCANP13611 AC002553.2-201ENST00000453217 340 ntBASIC2.32□□□□□ -2.04
VCANP13611 AC093278.1-201ENST00000494700 600 ntBASIC2.32□□□□□ -2.04
VCANP13611 AC119751.1-201ENST00000513357 765 ntBASIC2.32□□□□□ -2.04
VCANP13611 RN7SKP40-201ENST00000517211 242 ntBASIC2.32□□□□□ -2.04
VCANP13611 AC005046.1-201ENST00000608515 625 ntBASIC2.32□□□□□ -2.04
VCANP13611 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.32□□□□□ -2.04
VCANP13611 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCANP13611 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms